Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HERC6Q8IVU3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 AC114812.1-204ENST00000449669 728 ntBASIC16.73■□□□□ 0.27
HERC6Q8IVU3 RPS2P36-201ENST00000456516 831 ntBASIC16.73■□□□□ 0.27
HERC6Q8IVU3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 AC245884.6-201ENST00000515672 1067 ntBASIC16.73■□□□□ 0.27
HERC6Q8IVU3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 SPCS2P2-201ENST00000603270 608 ntBASIC16.73■□□□□ 0.27
HERC6Q8IVU3 AC128714.1-201ENST00000637035 887 ntBASIC16.73■□□□□ 0.27
HERC6Q8IVU3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.73■□□□□ 0.27
HERC6Q8IVU3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.73■□□□□ 0.27
HERC6Q8IVU3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 RNU1-114P-201ENST00000365297 166 ntBASIC16.72■□□□□ 0.27
HERC6Q8IVU3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 MIR769-201ENST00000390225 118 ntBASIC16.72■□□□□ 0.27
HERC6Q8IVU3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AC079178.1-201ENST00000420915 656 ntBASIC16.72■□□□□ 0.27
HERC6Q8IVU3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AL133466.1-201ENST00000447582 150 ntBASIC16.72■□□□□ 0.27
HERC6Q8IVU3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 RN7SL720P-201ENST00000488178 304 ntBASIC16.72■□□□□ 0.27
HERC6Q8IVU3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 COX5BP1-201ENST00000507622 393 ntBASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AC007663.3-201ENST00000609632 465 ntBASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AC138649.2-201ENST00000615886 705 ntBASIC16.72■□□□□ 0.27
HERC6Q8IVU3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 AC018892.3-201ENST00000623986 2499 ntBASIC16.72■□□□□ 0.27
HERC6Q8IVU3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.72■□□□□ 0.27
HERC6Q8IVU3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms