Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 INTS4P2-202ENST00000614726 2019 ntBASIC16.5■□□□□ 0.23
RNF135Q8IUD6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 AL592424.1-201ENST00000563624 1536 ntBASIC16.5■□□□□ 0.23
RNF135Q8IUD6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RNF135Q8IUD6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AC006449.6-201ENST00000612330 2296 ntBASIC16.49■□□□□ 0.23
RNF135Q8IUD6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AC138028.6-201ENST00000616106 1482 ntBASIC16.49■□□□□ 0.23
RNF135Q8IUD6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 MSTO2P-201ENST00000314835 1709 ntBASIC16.49■□□□□ 0.23
RNF135Q8IUD6 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AL136982.4-201ENST00000437689 1740 ntBASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AC253536.4-201ENST00000440539 267 ntBASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AC023310.1-201ENST00000554836 735 ntBASIC16.49■□□□□ 0.23
RNF135Q8IUD6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 CLUHP6-201ENST00000580789 941 ntBASIC16.49■□□□□ 0.23
RNF135Q8IUD6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF135Q8IUD6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 AL139384.1-201ENST00000612143 3047 ntBASIC16.48■□□□□ 0.23
RNF135Q8IUD6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 AC011270.2-201ENST00000624293 2550 ntBASIC16.48■□□□□ 0.23
RNF135Q8IUD6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 FNTAP2-201ENST00000430308 634 ntBASIC16.48■□□□□ 0.23
RNF135Q8IUD6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 Z93015.1-201ENST00000451718 390 ntBASIC16.48■□□□□ 0.23
RNF135Q8IUD6 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 SCARNA20.5-201ENST00000516991 142 ntBASIC16.48■□□□□ 0.23
RNF135Q8IUD6 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF135Q8IUD6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF135Q8IUD6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF135Q8IUD6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF135Q8IUD6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF135Q8IUD6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms