Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.56□□□□□ -0.72
CSMD3Q7Z407 AC103691.2-201ENST00000618824 433 ntBASIC10.56□□□□□ -0.72
CSMD3Q7Z407 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.56□□□□□ -0.72
CSMD3Q7Z407 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CSMD3Q7Z407 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC10.56□□□□□ -0.72
CSMD3Q7Z407 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CSMD3Q7Z407 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CSMD3Q7Z407 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 AC010491.1-201ENST00000563101 2797 ntBASIC10.55□□□□□ -0.72
CSMD3Q7Z407 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 AL353637.1-201ENST00000451571 732 ntBASIC10.55□□□□□ -0.72
CSMD3Q7Z407 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 AC006449.5-201ENST00000610658 2098 ntBASIC10.55□□□□□ -0.72
CSMD3Q7Z407 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 LSM5-207ENST00000410044 687 ntTSL 3 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 MIR6858-201ENST00000620733 67 ntBASIC10.55□□□□□ -0.72
CSMD3Q7Z407 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 OR2K2-202ENST00000374428 1038 ntBASIC10.55□□□□□ -0.72
CSMD3Q7Z407 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 AC242376.2-201ENST00000619355 883 ntBASIC10.55□□□□□ -0.72
CSMD3Q7Z407 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 REXO1L2P-201ENST00000425429 2069 ntBASIC10.55□□□□□ -0.72
CSMD3Q7Z407 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CSMD3Q7Z407 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AC025271.4-201ENST00000621477 1726 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 KRT8P29-201ENST00000420409 1371 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AC124067.4-201ENST00000519691 2379 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 MESTP3-201ENST00000503460 968 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 PAM16-211ENST00000575848 518 ntTSL 3 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AL161773.1-201ENST00000624845 863 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AP000593.2-201ENST00000542775 1433 ntBASIC10.54□□□□□ -0.72
CSMD3Q7Z407 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CSMD3Q7Z407 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms