Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP31Q70CQ4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
USP31Q70CQ4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.35■□□□□ 0.85
USP31Q70CQ4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP31Q70CQ4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
USP31Q70CQ4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP31Q70CQ4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.35■□□□□ 0.85
USP31Q70CQ4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
USP31Q70CQ4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP31Q70CQ4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP31Q70CQ4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 CU633904.3-201ENST00000624042 1029 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AC092850.2-201ENST00000623821 2697 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AC091046.1-201ENST00000331871 207 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AC011742.3-201ENST00000439053 820 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 VDAC1P1-201ENST00000439229 848 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 E2F3P2-201ENST00000447755 1422 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 RN7SL11P-201ENST00000471305 293 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP31Q70CQ4 AL160314.3-201ENST00000556041 767 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 AL161670.2-201ENST00000557650 1227 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 RN7SL163P-201ENST00000583100 276 ntBASIC20.34■□□□□ 0.85
USP31Q70CQ4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.34■□□□□ 0.85
USP31Q70CQ4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP31Q70CQ4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC20.33■□□□□ 0.85
USP31Q70CQ4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.33■□□□□ 0.84
USP31Q70CQ4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.33■□□□□ 0.84
USP31Q70CQ4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.33■□□□□ 0.84
USP31Q70CQ4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.33■□□□□ 0.84
USP31Q70CQ4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.33■□□□□ 0.84
USP31Q70CQ4 AC104073.2-201ENST00000453737 312 ntBASIC20.33■□□□□ 0.84
USP31Q70CQ4 ALG3P1-201ENST00000508806 1114 ntBASIC20.33■□□□□ 0.84
USP31Q70CQ4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.33■□□□□ 0.84
USP31Q70CQ4 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC20.33■□□□□ 0.84
USP31Q70CQ4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP31Q70CQ4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP31Q70CQ4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP31Q70CQ4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP31Q70CQ4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.32■□□□□ 0.84
USP31Q70CQ4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
USP31Q70CQ4 AC020658.6-201ENST00000623564 1870 ntBASIC20.32■□□□□ 0.84
USP31Q70CQ4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC20.32■□□□□ 0.84
USP31Q70CQ4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP31Q70CQ4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.32■□□□□ 0.84
USP31Q70CQ4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP31Q70CQ4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.32■□□□□ 0.84
USP31Q70CQ4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP31Q70CQ4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP31Q70CQ4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP31Q70CQ4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
USP31Q70CQ4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms