Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC62Q6P9F0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
CCDC62Q6P9F0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC62Q6P9F0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC62Q6P9F0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 BRWD1P1-201ENST00000401091 371 ntBASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 GPR182-203ENST00000622922 591 ntBASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC62Q6P9F0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 AC024909.3-201ENST00000611513 2257 ntBASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 RNU1-114P-201ENST00000365297 166 ntBASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 ACTBP8-201ENST00000403258 1108 ntBASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 KLF2P2-201ENST00000416807 1039 ntBASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 MIR6787-201ENST00000616675 61 ntBASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC62Q6P9F0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC62Q6P9F0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms