Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.8□□□□□ -0.52
MRPL54Q6P161 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
MRPL54Q6P161 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
MRPL54Q6P161 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
MRPL54Q6P161 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.8□□□□□ -0.52
MRPL54Q6P161 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.8□□□□□ -0.52
MRPL54Q6P161 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.8□□□□□ -0.52
MRPL54Q6P161 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.8□□□□□ -0.52
MRPL54Q6P161 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.8□□□□□ -0.52
MRPL54Q6P161 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
MRPL54Q6P161 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 AL645939.2-201ENST00000427340 991 ntBASIC11.79□□□□□ -0.52
MRPL54Q6P161 AC117947.1-201ENST00000427448 529 ntBASIC11.79□□□□□ -0.52
MRPL54Q6P161 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 METTL23-204ENST00000586752 904 ntTSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 BNIP3P18-201ENST00000593976 575 ntBASIC11.79□□□□□ -0.52
MRPL54Q6P161 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 AC083849.1-201ENST00000615227 514 ntBASIC11.79□□□□□ -0.52
MRPL54Q6P161 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 AL356585.2-201ENST00000625078 2396 ntBASIC11.79□□□□□ -0.52
MRPL54Q6P161 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 TCAF1P1-201ENST00000414990 2232 ntBASIC11.79□□□□□ -0.52
MRPL54Q6P161 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
MRPL54Q6P161 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
MRPL54Q6P161 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
MRPL54Q6P161 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
MRPL54Q6P161 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms