Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 GHSR-202ENST00000427970 912 ntBASIC14.51□□□□□ -0.09
REEP3Q6NUK4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 SLED1-202ENST00000512051 380 ntBASIC14.51□□□□□ -0.09
REEP3Q6NUK4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 AL079307.3-201ENST00000556114 283 ntBASIC14.51□□□□□ -0.09
REEP3Q6NUK4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 MIR4453-201ENST00000584019 89 ntBASIC14.51□□□□□ -0.09
REEP3Q6NUK4 AL671883.3-201ENST00000603274 991 ntBASIC14.51□□□□□ -0.09
REEP3Q6NUK4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 MIR6069-201ENST00000620069 79 ntBASIC14.51□□□□□ -0.09
REEP3Q6NUK4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 AC232323.1-201ENST00000540724 2099 ntBASIC14.51□□□□□ -0.09
REEP3Q6NUK4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 REXO1L5P-201ENST00000622260 2098 ntBASIC14.51□□□□□ -0.09
REEP3Q6NUK4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
REEP3Q6NUK4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 MIR3687-2-201ENST00000577708 61 ntBASIC14.5□□□□□ -0.09
REEP3Q6NUK4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 AC011467.4-201ENST00000594891 528 ntBASIC14.5□□□□□ -0.09
REEP3Q6NUK4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 MIR3687-1-201ENST00000614492 61 ntBASIC14.5□□□□□ -0.09
REEP3Q6NUK4 MIR6080-201ENST00000617359 66 ntBASIC14.5□□□□□ -0.09
REEP3Q6NUK4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
REEP3Q6NUK4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
REEP3Q6NUK4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms