Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RFX7Q2KHR2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 TUBB1P2-201ENST00000422712 1306 ntBASIC18.6■□□□□ 0.57
RFX7Q2KHR2 TUBB1P1-201ENST00000503144 1300 ntBASIC18.6■□□□□ 0.57
RFX7Q2KHR2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 CSF2RBP1-201ENST00000447905 391 ntBASIC18.6■□□□□ 0.57
RFX7Q2KHR2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 RNA5SP412-201ENST00000516234 123 ntBASIC18.6■□□□□ 0.57
RFX7Q2KHR2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFX7Q2KHR2 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 AL645937.2-201ENST00000396808 931 ntBASIC18.59■□□□□ 0.57
RFX7Q2KHR2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 AC134312.5-201ENST00000568031 1313 ntBASIC18.59■□□□□ 0.57
RFX7Q2KHR2 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RFX7Q2KHR2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 AL355994.2-201ENST00000447882 704 ntBASIC18.58■□□□□ 0.57
RFX7Q2KHR2 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms