Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.06□□□□□ -0.16
FOXF1Q12946 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FOXF1Q12946 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FOXF1Q12946 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FOXF1Q12946 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
FOXF1Q12946 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.06□□□□□ -0.16
FOXF1Q12946 AL353779.1-201ENST00000434793 351 ntBASIC14.06□□□□□ -0.16
FOXF1Q12946 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.06□□□□□ -0.16
FOXF1Q12946 VDAC1P7-201ENST00000462417 847 ntBASIC14.06□□□□□ -0.16
FOXF1Q12946 AC104596.2-201ENST00000512793 793 ntBASIC14.06□□□□□ -0.16
FOXF1Q12946 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.06□□□□□ -0.16
FOXF1Q12946 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.06□□□□□ -0.16
FOXF1Q12946 WASH4P-201ENST00000564273 1246 ntBASIC14.06□□□□□ -0.16
FOXF1Q12946 AC140912.1-201ENST00000577171 1054 ntBASIC14.06□□□□□ -0.16
FOXF1Q12946 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 MIR8072-201ENST00000614241 80 ntBASIC14.06□□□□□ -0.16
FOXF1Q12946 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.06□□□□□ -0.16
FOXF1Q12946 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.06□□□□□ -0.16
FOXF1Q12946 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
FOXF1Q12946 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
FOXF1Q12946 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
FOXF1Q12946 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.06□□□□□ -0.16
FOXF1Q12946 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 AC126177.1-201ENST00000547829 2218 ntBASIC14.06□□□□□ -0.16
FOXF1Q12946 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.06□□□□□ -0.16
FOXF1Q12946 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.06□□□□□ -0.16
FOXF1Q12946 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXF1Q12946 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 CICP11-201ENST00000434745 2827 ntBASIC14.05□□□□□ -0.16
FOXF1Q12946 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXF1Q12946 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXF1Q12946 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXF1Q12946 AC148477.4-201ENST00000613430 1793 ntBASIC14.05□□□□□ -0.16
FOXF1Q12946 AC098850.1-201ENST00000419919 790 ntBASIC14.05□□□□□ -0.16
FOXF1Q12946 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.05□□□□□ -0.16
FOXF1Q12946 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXF1Q12946 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXF1Q12946 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXF1Q12946 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.05□□□□□ -0.16
FOXF1Q12946 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.05□□□□□ -0.16
FOXF1Q12946 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.05□□□□□ -0.16
FOXF1Q12946 AC138761.1-201ENST00000584393 385 ntBASIC14.05□□□□□ -0.16
FOXF1Q12946 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXF1Q12946 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
FOXF1Q12946 AC008494.3-201ENST00000606615 944 ntBASIC14.05□□□□□ -0.16
FOXF1Q12946 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXF1Q12946 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXF1Q12946 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXF1Q12946 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.05□□□□□ -0.16
FOXF1Q12946 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
FOXF1Q12946 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 KRT8P44-201ENST00000441609 1350 ntBASIC14.05□□□□□ -0.16
FOXF1Q12946 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
FOXF1Q12946 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
FOXF1Q12946 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXF1Q12946 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXF1Q12946 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXF1Q12946 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXF1Q12946 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXF1Q12946 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
FOXF1Q12946 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXF1Q12946 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXF1Q12946 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXF1Q12946 MYCLP2-201ENST00000449268 967 ntBASIC14.04□□□□□ -0.16
FOXF1Q12946 CRB3P1-201ENST00000449338 276 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms