Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
DSC1Q08554 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.33■□□□□ 0.2
DSC1Q08554 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DSC1Q08554 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DSC1Q08554 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
DSC1Q08554 AC055811.4-201ENST00000624039 1754 ntBASIC16.33■□□□□ 0.2
DSC1Q08554 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DSC1Q08554 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DSC1Q08554 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
DSC1Q08554 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
DSC1Q08554 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
DSC1Q08554 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
DSC1Q08554 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.33■□□□□ 0.2
DSC1Q08554 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DSC1Q08554 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
DSC1Q08554 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
DSC1Q08554 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.32■□□□□ 0.2
DSC1Q08554 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
DSC1Q08554 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
DSC1Q08554 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
DSC1Q08554 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.32■□□□□ 0.2
DSC1Q08554 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
DSC1Q08554 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.32■□□□□ 0.2
DSC1Q08554 BCYRN1-201ENST00000418539 200 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.32■□□□□ 0.2
DSC1Q08554 AC079178.1-201ENST00000420915 656 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.32■□□□□ 0.2
DSC1Q08554 AC018735.1-201ENST00000437208 1502 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.32■□□□□ 0.2
DSC1Q08554 AC004898.1-201ENST00000451057 766 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.32■□□□□ 0.2
DSC1Q08554 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
DSC1Q08554 AL391280.1-201ENST00000506969 1062 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.32■□□□□ 0.2
DSC1Q08554 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.32■□□□□ 0.2
DSC1Q08554 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
DSC1Q08554 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 AC004466.1-201ENST00000599515 1080 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 OR10B1P-201ENST00000601666 907 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.32■□□□□ 0.2
DSC1Q08554 REXO1L5P-201ENST00000622260 2098 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DSC1Q08554 PRAL-201ENST00000624952 3286 ntBASIC16.32■□□□□ 0.2
DSC1Q08554 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
DSC1Q08554 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.32■□□□□ 0.2
DSC1Q08554 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
DSC1Q08554 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DSC1Q08554 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.31■□□□□ 0.2
DSC1Q08554 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DSC1Q08554 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
DSC1Q08554 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.31■□□□□ 0.2
DSC1Q08554 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
DSC1Q08554 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.31■□□□□ 0.2
DSC1Q08554 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 CLUHP2-201ENST00000426660 1303 ntBASIC16.31■□□□□ 0.2
DSC1Q08554 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.31■□□□□ 0.2
DSC1Q08554 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.31■□□□□ 0.2
DSC1Q08554 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
DSC1Q08554 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.31■□□□□ 0.2
DSC1Q08554 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.31■□□□□ 0.2
DSC1Q08554 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.31■□□□□ 0.2
DSC1Q08554 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.31■□□□□ 0.2
DSC1Q08554 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.31■□□□□ 0.2
DSC1Q08554 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DSC1Q08554 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.31■□□□□ 0.2
DSC1Q08554 PPY2P-201ENST00000582808 702 ntBASIC16.31■□□□□ 0.2
DSC1Q08554 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.31■□□□□ 0.2
DSC1Q08554 ZACNP1-201ENST00000612259 710 ntBASIC16.31■□□□□ 0.2
DSC1Q08554 AC138466.3-201ENST00000619983 221 ntBASIC16.31■□□□□ 0.2
DSC1Q08554 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.31■□□□□ 0.2
DSC1Q08554 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DSC1Q08554 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.31■□□□□ 0.2
DSC1Q08554 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms