Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SSBP1Q04837 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSBP1Q04837 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SSBP1Q04837 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.17□□□□□ -0.3
SSBP1Q04837 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 AC018529.2-202ENST00000611482 3087 ntBASIC13.16□□□□□ -0.3
SSBP1Q04837 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 AC097359.2-201ENST00000604992 2389 ntBASIC13.16□□□□□ -0.3
SSBP1Q04837 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP1Q04837 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SSBP1Q04837 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP1Q04837 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 AP001267.2-201ENST00000532619 2086 ntBASIC13.16□□□□□ -0.3
SSBP1Q04837 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SSBP1Q04837 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SSBP1Q04837 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP1Q04837 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP1Q04837 TSPY19P-201ENST00000418461 509 ntBASIC13.16□□□□□ -0.3
SSBP1Q04837 RHOQP3-201ENST00000437982 621 ntBASIC13.16□□□□□ -0.3
SSBP1Q04837 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 TSPY18P-201ENST00000441642 509 ntBASIC13.16□□□□□ -0.3
SSBP1Q04837 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SSBP1Q04837 AC096734.2-201ENST00000562054 433 ntBASIC13.16□□□□□ -0.3
SSBP1Q04837 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.16□□□□□ -0.3
SSBP1Q04837 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SSBP1Q04837 AC007326.2-201ENST00000624224 7579 ntBASIC13.16□□□□□ -0.3
SSBP1Q04837 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSBP1Q04837 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SSBP1Q04837 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP1Q04837 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SSBP1Q04837 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.15□□□□□ -0.3
SSBP1Q04837 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.15□□□□□ -0.3
SSBP1Q04837 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SSBP1Q04837 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.15□□□□□ -0.3
SSBP1Q04837 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SSBP1Q04837 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 RPS2P28-201ENST00000314255 741 ntBASIC13.15□□□□□ -0.3
SSBP1Q04837 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.15□□□□□ -0.3
SSBP1Q04837 VN2R19P-201ENST00000442399 1052 ntBASIC13.15□□□□□ -0.3
SSBP1Q04837 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SSBP1Q04837 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SSBP1Q04837 AC091304.2-201ENST00000564639 760 ntBASIC13.15□□□□□ -0.3
SSBP1Q04837 AL049597.2-201ENST00000565575 961 ntBASIC13.15□□□□□ -0.3
SSBP1Q04837 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP1Q04837 LINC01711-201ENST00000598340 967 ntBASIC13.15□□□□□ -0.3
SSBP1Q04837 AC026979.3-201ENST00000607315 403 ntBASIC13.15□□□□□ -0.3
SSBP1Q04837 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.15□□□□□ -0.3
SSBP1Q04837 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms