Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CACNA1BQ00975 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 KRT8P30-201ENST00000432100 650 ntBASIC14.16□□□□□ -0.14
CACNA1BQ00975 AC245100.5-201ENST00000452108 331 ntBASIC14.16□□□□□ -0.14
CACNA1BQ00975 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CACNA1BQ00975 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CACNA1BQ00975 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CACNA1BQ00975 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CACNA1BQ00975 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CACNA1BQ00975 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CACNA1BQ00975 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CACNA1BQ00975 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.16□□□□□ -0.14
CACNA1BQ00975 HLA-A-202ENST00000376806 1854 ntBASIC14.16□□□□□ -0.14
CACNA1BQ00975 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 ACTBP8-201ENST00000403258 1108 ntBASIC14.15□□□□□ -0.14
CACNA1BQ00975 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.15□□□□□ -0.14
CACNA1BQ00975 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 TMA16-204ENST00000508268 608 ntTSL 2 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 AL590235.1-201ENST00000564650 861 ntBASIC14.15□□□□□ -0.14
CACNA1BQ00975 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 MEG3_2.1-201ENST00000611456 105 ntBASIC14.15□□□□□ -0.14
CACNA1BQ00975 AC087392.5-201ENST00000612517 489 ntBASIC14.15□□□□□ -0.14
CACNA1BQ00975 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 HNRNPABP1-201ENST00000406003 734 ntBASIC14.15□□□□□ -0.14
CACNA1BQ00975 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 RN7SL258P-201ENST00000478664 300 ntBASIC14.15□□□□□ -0.14
CACNA1BQ00975 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 AP000911.2-201ENST00000534330 502 ntBASIC14.15□□□□□ -0.14
CACNA1BQ00975 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CACNA1BQ00975 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CACNA1BQ00975 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 ABALON-201ENST00000629058 1903 ntBASIC14.14□□□□□ -0.15
CACNA1BQ00975 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 RN7SL69P-201ENST00000468423 272 ntBASIC14.14□□□□□ -0.15
CACNA1BQ00975 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 HLA-J-204ENST00000495278 958 ntBASIC14.14□□□□□ -0.15
CACNA1BQ00975 MRPL22P1-201ENST00000505398 616 ntBASIC14.14□□□□□ -0.15
CACNA1BQ00975 ABHD17AP9-201ENST00000561925 548 ntBASIC14.14□□□□□ -0.15
CACNA1BQ00975 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.14□□□□□ -0.15
CACNA1BQ00975 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CACNA1BQ00975 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms