Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.74□□□□□ -0.37
SPCS3P61009 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.74□□□□□ -0.37
SPCS3P61009 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.74□□□□□ -0.37
SPCS3P61009 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 AL450472.2-201ENST00000603663 1156 ntBASIC12.74□□□□□ -0.37
SPCS3P61009 AC068137.2-201ENST00000605408 478 ntBASIC12.74□□□□□ -0.37
SPCS3P61009 Z83851.2-201ENST00000609564 659 ntBASIC12.74□□□□□ -0.37
SPCS3P61009 AL691432.3-201ENST00000621860 400 ntBASIC12.74□□□□□ -0.37
SPCS3P61009 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
SPCS3P61009 CES1P1-201ENST00000421606 1704 ntBASIC12.74□□□□□ -0.37
SPCS3P61009 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.74□□□□□ -0.37
SPCS3P61009 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SPCS3P61009 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 MROH4P-201ENST00000431302 1578 ntBASIC12.73□□□□□ -0.37
SPCS3P61009 AC087386.2-201ENST00000623212 4637 ntBASIC12.73□□□□□ -0.37
SPCS3P61009 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 AC067750.1-201ENST00000608826 6545 ntBASIC12.73□□□□□ -0.37
SPCS3P61009 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SPCS3P61009 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SPCS3P61009 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
SPCS3P61009 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SPCS3P61009 RPS8P6-201ENST00000426177 609 ntBASIC12.73□□□□□ -0.37
SPCS3P61009 AC112191.1-201ENST00000523689 701 ntBASIC12.73□□□□□ -0.37
SPCS3P61009 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.73□□□□□ -0.37
SPCS3P61009 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 AP001005.1-201ENST00000571755 1248 ntBASIC12.73□□□□□ -0.37
SPCS3P61009 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.73□□□□□ -0.37
SPCS3P61009 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.73□□□□□ -0.37
SPCS3P61009 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 AL031008.1-201ENST00000619963 541 ntBASIC12.73□□□□□ -0.37
SPCS3P61009 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SPCS3P61009 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.73□□□□□ -0.37
SPCS3P61009 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.73□□□□□ -0.37
SPCS3P61009 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.73□□□□□ -0.37
SPCS3P61009 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.73□□□□□ -0.37
SPCS3P61009 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
SPCS3P61009 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SPCS3P61009 Z82170.1-201ENST00000625081 3192 ntBASIC12.73□□□□□ -0.37
SPCS3P61009 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
SPCS3P61009 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
SPCS3P61009 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms