Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.39□□□□□ -0.27
AP3S2P59780 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 AC152010.1-201ENST00000415779 2006 ntBASIC13.39□□□□□ -0.27
AP3S2P59780 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.39□□□□□ -0.27
AP3S2P59780 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.39□□□□□ -0.27
AP3S2P59780 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.39□□□□□ -0.27
AP3S2P59780 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 KRT18P57-201ENST00000443599 1254 ntBASIC13.39□□□□□ -0.27
AP3S2P59780 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 KRT16P4-201ENST00000453883 522 ntBASIC13.39□□□□□ -0.27
AP3S2P59780 AC132008.2-207ENST00000454517 770 ntBASIC13.39□□□□□ -0.27
AP3S2P59780 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.39□□□□□ -0.27
AP3S2P59780 AC012615.1-201ENST00000565797 1299 ntBASIC13.39□□□□□ -0.27
AP3S2P59780 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 AP002414.4-201ENST00000589764 1148 ntBASIC13.39□□□□□ -0.27
AP3S2P59780 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.39□□□□□ -0.27
AP3S2P59780 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
AP3S2P59780 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
AP3S2P59780 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
AP3S2P59780 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
AP3S2P59780 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
AP3S2P59780 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
AP3S2P59780 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.38□□□□□ -0.27
AP3S2P59780 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.38□□□□□ -0.27
AP3S2P59780 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
AP3S2P59780 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.38□□□□□ -0.27
AP3S2P59780 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.38□□□□□ -0.27
AP3S2P59780 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.38□□□□□ -0.27
AP3S2P59780 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
AP3S2P59780 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.38□□□□□ -0.27
AP3S2P59780 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 MTDHP4-201ENST00000600287 670 ntBASIC13.38□□□□□ -0.27
AP3S2P59780 AC138894.3-201ENST00000603787 634 ntBASIC13.38□□□□□ -0.27
AP3S2P59780 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
AP3S2P59780 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.38□□□□□ -0.27
AP3S2P59780 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.38□□□□□ -0.27
AP3S2P59780 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
AP3S2P59780 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.38□□□□□ -0.27
AP3S2P59780 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.38□□□□□ -0.27
AP3S2P59780 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.38□□□□□ -0.27
AP3S2P59780 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
AP3S2P59780 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
AP3S2P59780 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms