Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2AP49459 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2AP49459 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2AP49459 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC9.94□□□□□ -0.82
UBE2AP49459 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2AP49459 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
UBE2AP49459 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC9.94□□□□□ -0.82
UBE2AP49459 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2AP49459 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2AP49459 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
UBE2AP49459 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2AP49459 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2AP49459 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2AP49459 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2AP49459 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC9.94□□□□□ -0.82
UBE2AP49459 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2AP49459 AC134407.2-201ENST00000625089 1978 ntBASIC9.94□□□□□ -0.82
UBE2AP49459 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2AP49459 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC9.93□□□□□ -0.82
UBE2AP49459 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 FAM45BP-202ENST00000592932 1624 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 AC008677.1-201ENST00000519230 1561 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC9.93□□□□□ -0.82
UBE2AP49459 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC9.93□□□□□ -0.82
UBE2AP49459 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC9.93□□□□□ -0.82
UBE2AP49459 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 CD82-202ENST00000342935 967 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
UBE2AP49459 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 MCCD1P2-201ENST00000423228 335 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 HTR5BP-201ENST00000430851 1154 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 AL592309.1-201ENST00000443127 649 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 CEND1P1-201ENST00000451006 455 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC9.93□□□□□ -0.82
UBE2AP49459 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC9.93□□□□□ -0.82
UBE2AP49459 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 KRT8P23-201ENST00000560090 1207 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC9.93□□□□□ -0.82
UBE2AP49459 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
UBE2AP49459 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC9.93□□□□□ -0.82
UBE2AP49459 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC9.93□□□□□ -0.82
UBE2AP49459 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC9.93□□□□□ -0.82
UBE2AP49459 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
UBE2AP49459 AC092902.6-201ENST00000641783 218 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 DKFZP434H168-201ENST00000567381 1905 ntBASIC9.93□□□□□ -0.82
UBE2AP49459 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC9.93□□□□□ -0.82
UBE2AP49459 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
UBE2AP49459 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2AP49459 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms