Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TM4SF4P48230 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.29■□□□□ 0.36
TM4SF4P48230 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.29■□□□□ 0.36
TM4SF4P48230 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.29■□□□□ 0.36
TM4SF4P48230 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TM4SF4P48230 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.28■□□□□ 0.36
TM4SF4P48230 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TM4SF4P48230 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.28■□□□□ 0.36
TM4SF4P48230 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 RN7SKP230-201ENST00000365642 335 ntBASIC17.28■□□□□ 0.36
TM4SF4P48230 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.28■□□□□ 0.36
TM4SF4P48230 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.28■□□□□ 0.36
TM4SF4P48230 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.28■□□□□ 0.36
TM4SF4P48230 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.28■□□□□ 0.36
TM4SF4P48230 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.28■□□□□ 0.36
TM4SF4P48230 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TM4SF4P48230 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.28■□□□□ 0.36
TM4SF4P48230 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TM4SF4P48230 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.28■□□□□ 0.36
TM4SF4P48230 CASP16P-204ENST00000635032 809 ntBASIC17.28■□□□□ 0.36
TM4SF4P48230 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TM4SF4P48230 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.28■□□□□ 0.36
TM4SF4P48230 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.28■□□□□ 0.36
TM4SF4P48230 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.28■□□□□ 0.36
TM4SF4P48230 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.28■□□□□ 0.36
TM4SF4P48230 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TM4SF4P48230 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TM4SF4P48230 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TM4SF4P48230 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TM4SF4P48230 AC090502.4-201ENST00000551714 1386 ntBASIC17.28■□□□□ 0.36
TM4SF4P48230 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.27■□□□□ 0.36
TM4SF4P48230 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TM4SF4P48230 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 AL360270.3-201ENST00000609118 1348 ntBASIC17.27■□□□□ 0.36
TM4SF4P48230 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
TM4SF4P48230 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TM4SF4P48230 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TM4SF4P48230 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.27■□□□□ 0.36
TM4SF4P48230 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC17.27■□□□□ 0.36
TM4SF4P48230 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TM4SF4P48230 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 HIST2H2BA-201ENST00000412169 381 ntBASIC17.27■□□□□ 0.36
TM4SF4P48230 BANF1P3-201ENST00000412556 261 ntBASIC17.27■□□□□ 0.36
TM4SF4P48230 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.27■□□□□ 0.36
TM4SF4P48230 BCAS2P2-201ENST00000425064 674 ntBASIC17.27■□□□□ 0.36
TM4SF4P48230 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 DUTP3-201ENST00000450025 415 ntBASIC17.27■□□□□ 0.36
TM4SF4P48230 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.27■□□□□ 0.36
TM4SF4P48230 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.27■□□□□ 0.36
TM4SF4P48230 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.27■□□□□ 0.36
TM4SF4P48230 AP001184.1-201ENST00000637936 376 ntBASIC17.27■□□□□ 0.36
TM4SF4P48230 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TM4SF4P48230 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TM4SF4P48230 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TM4SF4P48230 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM4SF4P48230 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM4SF4P48230 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TM4SF4P48230 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TM4SF4P48230 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
TM4SF4P48230 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM4SF4P48230 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TM4SF4P48230 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TM4SF4P48230 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
TM4SF4P48230 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.26■□□□□ 0.35
TM4SF4P48230 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 KRT18P9-201ENST00000604826 1300 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TM4SF4P48230 AC015909.3-201ENST00000572855 1794 ntBASIC17.26■□□□□ 0.35
TM4SF4P48230 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TM4SF4P48230 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.26■□□□□ 0.35
TM4SF4P48230 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms