Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SLC6A12P48065 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC6A12P48065 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SLC6A12P48065 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SLC6A12P48065 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 AC013726.1-201ENST00000563747 2285 ntBASIC14.95□□□□□ -0.02
SLC6A12P48065 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC6A12P48065 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A12P48065 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC6A12P48065 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SLC6A12P48065 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 AC011270.2-201ENST00000624293 2550 ntBASIC14.94□□□□□ -0.02
SLC6A12P48065 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC6A12P48065 UGT1A2P-201ENST00000454886 866 ntBASIC14.94□□□□□ -0.02
SLC6A12P48065 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC6A12P48065 FAM86LP-201ENST00000478302 853 ntBASIC14.94□□□□□ -0.02
SLC6A12P48065 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.94□□□□□ -0.02
SLC6A12P48065 TPRX2P-201ENST00000535362 881 ntBASIC14.94□□□□□ -0.02
SLC6A12P48065 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
SLC6A12P48065 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.94□□□□□ -0.02
SLC6A12P48065 AL662799.1-202ENST00000614205 422 ntBASIC14.94□□□□□ -0.02
SLC6A12P48065 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
SLC6A12P48065 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC6A12P48065 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC6A12P48065 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SLC6A12P48065 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC6A12P48065 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SLC6A12P48065 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC6A12P48065 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A12P48065 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 DRD5P1-201ENST00000456605 1438 ntBASIC14.93□□□□□ -0.02
SLC6A12P48065 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A12P48065 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A12P48065 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.93□□□□□ -0.02
SLC6A12P48065 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 SPDYE19P-201ENST00000338590 713 ntBASIC14.93□□□□□ -0.02
SLC6A12P48065 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC6A12P48065 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC6A12P48065 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.93□□□□□ -0.02
SLC6A12P48065 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SLC6A12P48065 RN7SL399P-201ENST00000471648 279 ntBASIC14.93□□□□□ -0.02
SLC6A12P48065 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A12P48065 AC026410.3-201ENST00000514280 936 ntBASIC14.93□□□□□ -0.02
SLC6A12P48065 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.93□□□□□ -0.02
SLC6A12P48065 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.93□□□□□ -0.02
SLC6A12P48065 RRP7BP-205ENST00000566851 833 ntBASIC14.93□□□□□ -0.02
SLC6A12P48065 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC6A12P48065 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC6A12P48065 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SLC6A12P48065 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC6A12P48065 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SLC6A12P48065 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
SLC6A12P48065 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms