Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA4P43681 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA4P43681 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA4P43681 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA4P43681 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA4P43681 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 TPRX2P-201ENST00000535362 881 ntBASIC15.66■□□□□ 0.1
CHRNA4P43681 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.66■□□□□ 0.1
CHRNA4P43681 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CHRNA4P43681 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 AC000095.1-201ENST00000603208 874 ntBASIC15.66■□□□□ 0.1
CHRNA4P43681 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
CHRNA4P43681 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CHRNA4P43681 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 AL359258.3-201ENST00000622910 2331 ntBASIC15.66■□□□□ 0.1
CHRNA4P43681 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA4P43681 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
CHRNA4P43681 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA4P43681 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA4P43681 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA4P43681 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 NFIC-211ENST00000641145 8399 ntBASIC15.65■□□□□ 0.1
CHRNA4P43681 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA4P43681 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA4P43681 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CHRNA4P43681 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNA4P43681 BCRP1-201ENST00000444246 691 ntBASIC15.65■□□□□ 0.1
CHRNA4P43681 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA4P43681 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA4P43681 SERBP1P5-201ENST00000510079 1181 ntBASIC15.65■□□□□ 0.1
CHRNA4P43681 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNA4P43681 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
CHRNA4P43681 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA4P43681 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNA4P43681 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNA4P43681 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.65■□□□□ 0.1
CHRNA4P43681 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA4P43681 AL355385.1-201ENST00000606123 409 ntBASIC15.65■□□□□ 0.1
CHRNA4P43681 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA4P43681 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA4P43681 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA4P43681 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA4P43681 LINC02228-204ENST00000642115 2962 ntBASIC15.65■□□□□ 0.1
CHRNA4P43681 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CHRNA4P43681 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA4P43681 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CHRNA4P43681 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNA4P43681 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA4P43681 LINC00528-201ENST00000600723 2160 ntBASIC15.65■□□□□ 0.1
CHRNA4P43681 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA4P43681 AGAP7P-201ENST00000582299 2062 ntBASIC15.64■□□□□ 0.09
CHRNA4P43681 AGAP14-201ENST00000624701 2060 ntBASIC15.64■□□□□ 0.09
CHRNA4P43681 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA4P43681 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA4P43681 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA4P43681 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CHRNA4P43681 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA4P43681 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA4P43681 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA4P43681 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA4P43681 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA4P43681 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA4P43681 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA4P43681 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA4P43681 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA4P43681 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA4P43681 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA4P43681 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA4P43681 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA4P43681 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.64■□□□□ 0.09
CHRNA4P43681 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.64■□□□□ 0.09
CHRNA4P43681 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms