Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.61□□□□□ -0.23
GDNFP39905 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.61□□□□□ -0.23
GDNFP39905 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
GDNFP39905 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
GDNFP39905 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
GDNFP39905 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
GDNFP39905 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
GDNFP39905 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
GDNFP39905 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GDNFP39905 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.6□□□□□ -0.23
GDNFP39905 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
GDNFP39905 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
GDNFP39905 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
GDNFP39905 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.6□□□□□ -0.23
GDNFP39905 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.6□□□□□ -0.23
GDNFP39905 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 PMS2P4-201ENST00000412466 1052 ntBASIC13.6□□□□□ -0.23
GDNFP39905 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.6□□□□□ -0.23
GDNFP39905 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.6□□□□□ -0.23
GDNFP39905 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.6□□□□□ -0.23
GDNFP39905 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GDNFP39905 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 AC074386.1-202ENST00000463561 864 ntBASIC13.6□□□□□ -0.23
GDNFP39905 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 PGAM5P1-201ENST00000518923 814 ntBASIC13.6□□□□□ -0.23
GDNFP39905 MIR3909-201ENST00000579518 119 ntBASIC13.6□□□□□ -0.23
GDNFP39905 AC068137.2-201ENST00000605408 478 ntBASIC13.6□□□□□ -0.23
GDNFP39905 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.6□□□□□ -0.23
GDNFP39905 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GDNFP39905 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
GDNFP39905 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GDNFP39905 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 AC126335.2-201ENST00000623362 4637 ntBASIC13.59□□□□□ -0.23
GDNFP39905 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
GDNFP39905 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
GDNFP39905 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
GDNFP39905 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 FAM8A3P-201ENST00000427218 844 ntBASIC13.59□□□□□ -0.23
GDNFP39905 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 KRT18P58-201ENST00000527480 1120 ntBASIC13.59□□□□□ -0.23
GDNFP39905 AP002472.1-201ENST00000577490 586 ntBASIC13.59□□□□□ -0.23
GDNFP39905 AC027601.5-201ENST00000624065 2482 ntBASIC13.59□□□□□ -0.23
GDNFP39905 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.59□□□□□ -0.23
GDNFP39905 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms