Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SFTPDP35247 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SFTPDP35247 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.1□□□□□ -0.15
SFTPDP35247 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.1□□□□□ -0.15
SFTPDP35247 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 KRT18P43-201ENST00000469825 1281 ntBASIC14.1□□□□□ -0.15
SFTPDP35247 AC055876.2-201ENST00000531834 546 ntBASIC14.1□□□□□ -0.15
SFTPDP35247 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 AC036164.1-201ENST00000570544 333 ntBASIC14.1□□□□□ -0.15
SFTPDP35247 MIR3197-201ENST00000582241 73 ntBASIC14.1□□□□□ -0.15
SFTPDP35247 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SFTPDP35247 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SFTPDP35247 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 AC138969.3-201ENST00000546612 1459 ntBASIC14.1□□□□□ -0.15
SFTPDP35247 AC138932.2-201ENST00000548268 1459 ntBASIC14.1□□□□□ -0.15
SFTPDP35247 AC126755.4-201ENST00000549796 1459 ntBASIC14.1□□□□□ -0.15
SFTPDP35247 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.1□□□□□ -0.15
SFTPDP35247 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.1□□□□□ -0.15
SFTPDP35247 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 AC068418.2-201ENST00000577309 3703 ntBASIC14.1□□□□□ -0.15
SFTPDP35247 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SFTPDP35247 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SFTPDP35247 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SFTPDP35247 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SFTPDP35247 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SFTPDP35247 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.09□□□□□ -0.15
SFTPDP35247 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.09□□□□□ -0.15
SFTPDP35247 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SFTPDP35247 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.09□□□□□ -0.15
SFTPDP35247 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SFTPDP35247 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SFTPDP35247 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 PIN1P1-201ENST00000412108 996 ntBASIC14.09□□□□□ -0.15
SFTPDP35247 MEP1AP4-201ENST00000423244 1087 ntBASIC14.09□□□□□ -0.15
SFTPDP35247 DFFBP1-201ENST00000433250 979 ntBASIC14.09□□□□□ -0.15
SFTPDP35247 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.09□□□□□ -0.15
SFTPDP35247 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.09□□□□□ -0.15
SFTPDP35247 AC190387.1-201ENST00000551683 408 ntBASIC14.09□□□□□ -0.15
SFTPDP35247 RARRES2P5-201ENST00000564013 466 ntBASIC14.09□□□□□ -0.15
SFTPDP35247 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.09□□□□□ -0.15
SFTPDP35247 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 CLK3P2-201ENST00000427566 1453 ntBASIC14.09□□□□□ -0.15
SFTPDP35247 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SFTPDP35247 AC020658.6-201ENST00000623564 1870 ntBASIC14.09□□□□□ -0.15
SFTPDP35247 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.09□□□□□ -0.15
SFTPDP35247 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.09□□□□□ -0.15
SFTPDP35247 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SFTPDP35247 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SFTPDP35247 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SFTPDP35247 SLC7A15P-201ENST00000424028 1363 ntBASIC14.09□□□□□ -0.15
SFTPDP35247 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SFTPDP35247 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.08□□□□□ -0.15
SFTPDP35247 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SFTPDP35247 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SFTPDP35247 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SFTPDP35247 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SFTPDP35247 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.08□□□□□ -0.15
SFTPDP35247 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
SFTPDP35247 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPDP35247 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPDP35247 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPDP35247 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SFTPDP35247 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms