Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TM4SF1P30408 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.92■□□□□ 0.62
TM4SF1P30408 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TM4SF1P30408 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC18.92■□□□□ 0.62
TM4SF1P30408 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.92■□□□□ 0.62
TM4SF1P30408 FAM58BP-201ENST00000439056 645 ntBASIC18.92■□□□□ 0.62
TM4SF1P30408 KLF2P1-201ENST00000447438 1042 ntBASIC18.92■□□□□ 0.62
TM4SF1P30408 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TM4SF1P30408 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.92■□□□□ 0.62
TM4SF1P30408 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.92■□□□□ 0.62
TM4SF1P30408 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TM4SF1P30408 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TM4SF1P30408 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.92■□□□□ 0.62
TM4SF1P30408 AC138696.2-201ENST00000607376 223 ntBASIC18.92■□□□□ 0.62
TM4SF1P30408 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.92■□□□□ 0.62
TM4SF1P30408 HLA-C-210ENST00000640219 976 ntBASIC18.92■□□□□ 0.62
TM4SF1P30408 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.92■□□□□ 0.62
TM4SF1P30408 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.92■□□□□ 0.62
TM4SF1P30408 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TM4SF1P30408 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.92■□□□□ 0.62
TM4SF1P30408 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TM4SF1P30408 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TM4SF1P30408 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.91■□□□□ 0.62
TM4SF1P30408 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 RCC2P8-201ENST00000502779 1035 ntBASIC18.91■□□□□ 0.62
TM4SF1P30408 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.91■□□□□ 0.62
TM4SF1P30408 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC18.91■□□□□ 0.62
TM4SF1P30408 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
TM4SF1P30408 AC092171.5-201ENST00000608012 942 ntBASIC18.91■□□□□ 0.62
TM4SF1P30408 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TM4SF1P30408 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 AL360270.3-201ENST00000609118 1348 ntBASIC18.91■□□□□ 0.62
TM4SF1P30408 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.91■□□□□ 0.62
TM4SF1P30408 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.91■□□□□ 0.62
TM4SF1P30408 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TM4SF1P30408 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.91■□□□□ 0.62
TM4SF1P30408 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM4SF1P30408 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC18.9■□□□□ 0.62
TM4SF1P30408 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.9■□□□□ 0.62
TM4SF1P30408 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TM4SF1P30408 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TM4SF1P30408 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 PGAM1P5-201ENST00000548011 764 ntBASIC18.9■□□□□ 0.62
TM4SF1P30408 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TM4SF1P30408 AC135983.4-201ENST00000564116 1262 ntBASIC18.9■□□□□ 0.62
TM4SF1P30408 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 NAP1L6-202ENST00000641404 1222 ntBASIC18.9■□□□□ 0.62
TM4SF1P30408 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.9■□□□□ 0.62
TM4SF1P30408 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 MST1L-201ENST00000442552 2185 ntBASIC18.9■□□□□ 0.62
TM4SF1P30408 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TM4SF1P30408 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.9■□□□□ 0.62
TM4SF1P30408 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.9■□□□□ 0.62
TM4SF1P30408 FAM90A7P-201ENST00000382628 1395 ntBASIC18.9■□□□□ 0.62
TM4SF1P30408 FAM90A23P-201ENST00000400136 1395 ntBASIC18.9■□□□□ 0.62
TM4SF1P30408 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.9■□□□□ 0.62
TM4SF1P30408 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TM4SF1P30408 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.9■□□□□ 0.62
TM4SF1P30408 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.9■□□□□ 0.62
TM4SF1P30408 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.89■□□□□ 0.62
TM4SF1P30408 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TM4SF1P30408 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TM4SF1P30408 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TM4SF1P30408 AC024909.3-201ENST00000611513 2257 ntBASIC18.89■□□□□ 0.61
TM4SF1P30408 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TM4SF1P30408 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms