Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
RAB4AP20338 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB4AP20338 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB4AP20338 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 AC008677.1-201ENST00000519230 1561 ntBASIC12.01□□□□□ -0.49
RAB4AP20338 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB4AP20338 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RAB4AP20338 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12□□□□□ -0.49
RAB4AP20338 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 AC145098.2-201ENST00000623593 3026 ntBASIC12□□□□□ -0.49
RAB4AP20338 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 AJ011931.1-201ENST00000618749 2492 ntBASIC12□□□□□ -0.49
RAB4AP20338 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12□□□□□ -0.49
RAB4AP20338 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12□□□□□ -0.49
RAB4AP20338 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 TSPY22P-201ENST00000427496 604 ntBASIC12□□□□□ -0.49
RAB4AP20338 AC246785.2-201ENST00000432512 513 ntBASIC12□□□□□ -0.49
RAB4AP20338 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 BX664615.1-201ENST00000443558 458 ntBASIC12□□□□□ -0.49
RAB4AP20338 HOMER2P1-201ENST00000455653 964 ntBASIC12□□□□□ -0.49
RAB4AP20338 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12□□□□□ -0.49
RAB4AP20338 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12□□□□□ -0.49
RAB4AP20338 MIR4492-201ENST00000581627 80 ntBASIC12□□□□□ -0.49
RAB4AP20338 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC12□□□□□ -0.49
RAB4AP20338 AC145285.6-201ENST00000604632 637 ntBASIC12□□□□□ -0.49
RAB4AP20338 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12□□□□□ -0.49
RAB4AP20338 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
RAB4AP20338 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12□□□□□ -0.49
RAB4AP20338 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
RAB4AP20338 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12□□□□□ -0.49
RAB4AP20338 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12□□□□□ -0.49
RAB4AP20338 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12□□□□□ -0.49
RAB4AP20338 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12□□□□□ -0.49
RAB4AP20338 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12□□□□□ -0.49
RAB4AP20338 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB4AP20338 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB4AP20338 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms