Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NFKB1P19838 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.81■□□□□ 0.12
NFKB1P19838 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.81■□□□□ 0.12
NFKB1P19838 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.81■□□□□ 0.12
NFKB1P19838 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
NFKB1P19838 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NFKB1P19838 AGAP7P-201ENST00000582299 2062 ntBASIC15.81■□□□□ 0.12
NFKB1P19838 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NFKB1P19838 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.81■□□□□ 0.12
NFKB1P19838 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.81■□□□□ 0.12
NFKB1P19838 AGAP14-201ENST00000624701 2060 ntBASIC15.81■□□□□ 0.12
NFKB1P19838 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NFKB1P19838 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.8■□□□□ 0.12
NFKB1P19838 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
NFKB1P19838 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NFKB1P19838 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.8■□□□□ 0.12
NFKB1P19838 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NFKB1P19838 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
NFKB1P19838 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.8■□□□□ 0.12
NFKB1P19838 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.8■□□□□ 0.12
NFKB1P19838 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NFKB1P19838 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.8■□□□□ 0.12
NFKB1P19838 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.8■□□□□ 0.12
NFKB1P19838 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.8■□□□□ 0.12
NFKB1P19838 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.8■□□□□ 0.12
NFKB1P19838 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.8■□□□□ 0.12
NFKB1P19838 SRD5A3P1-201ENST00000603021 949 ntBASIC15.8■□□□□ 0.12
NFKB1P19838 AC004790.1-201ENST00000612686 536 ntBASIC15.8■□□□□ 0.12
NFKB1P19838 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.8■□□□□ 0.12
NFKB1P19838 AL158212.4-201ENST00000624062 1286 ntBASIC15.8■□□□□ 0.12
NFKB1P19838 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.8■□□□□ 0.12
NFKB1P19838 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NFKB1P19838 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.8■□□□□ 0.12
NFKB1P19838 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.8■□□□□ 0.12
NFKB1P19838 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 AC023824.1-201ENST00000562945 2975 ntBASIC15.79■□□□□ 0.12
NFKB1P19838 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.79■□□□□ 0.12
NFKB1P19838 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.79■□□□□ 0.12
NFKB1P19838 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NFKB1P19838 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.79■□□□□ 0.12
NFKB1P19838 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.79■□□□□ 0.12
NFKB1P19838 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 MEIS3P1-201ENST00000495167 958 ntBASIC15.79■□□□□ 0.12
NFKB1P19838 AC104794.3-201ENST00000566840 1248 ntBASIC15.79■□□□□ 0.12
NFKB1P19838 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NFKB1P19838 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.79■□□□□ 0.12
NFKB1P19838 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NFKB1P19838 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NFKB1P19838 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms