Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGA1P17096 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 AL360270.3-201ENST00000609118 1348 ntBASIC15.94■□□□□ 0.14
HMGA1P17096 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGA1P17096 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 AL157414.3-201ENST00000624276 1954 ntBASIC15.93■□□□□ 0.14
HMGA1P17096 AC020658.6-201ENST00000623564 1870 ntBASIC15.93■□□□□ 0.14
HMGA1P17096 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGA1P17096 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGA1P17096 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGA1P17096 KRT8P44-201ENST00000441609 1350 ntBASIC15.93■□□□□ 0.14
HMGA1P17096 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.93■□□□□ 0.14
HMGA1P17096 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
HMGA1P17096 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HMGA1P17096 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.93■□□□□ 0.14
HMGA1P17096 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGA1P17096 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.93■□□□□ 0.14
HMGA1P17096 AP003171.2-201ENST00000528208 925 ntBASIC15.93■□□□□ 0.14
HMGA1P17096 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HMGA1P17096 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.93■□□□□ 0.14
HMGA1P17096 AC004466.1-201ENST00000599515 1080 ntBASIC15.93■□□□□ 0.14
HMGA1P17096 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HMGA1P17096 AC055811.4-201ENST00000624039 1754 ntBASIC15.92■□□□□ 0.14
HMGA1P17096 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA1P17096 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 AC008894.3-201ENST00000624324 3103 ntBASIC15.92■□□□□ 0.14
HMGA1P17096 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGA1P17096 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HMGA1P17096 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.92■□□□□ 0.14
HMGA1P17096 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA1P17096 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA1P17096 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGA1P17096 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA1P17096 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA1P17096 FAM8A4P-201ENST00000435433 1213 ntBASIC15.92■□□□□ 0.14
HMGA1P17096 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGA1P17096 AL591846.1-201ENST00000451736 433 ntBASIC15.92■□□□□ 0.14
HMGA1P17096 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 RPSAP36-202ENST00000494591 1261 ntBASIC15.92■□□□□ 0.14
HMGA1P17096 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.92■□□□□ 0.14
HMGA1P17096 EEF1DP1-201ENST00000585891 896 ntBASIC15.92■□□□□ 0.14
HMGA1P17096 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HMGA1P17096 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.92■□□□□ 0.14
HMGA1P17096 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGA1P17096 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HMGA1P17096 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.92■□□□□ 0.14
HMGA1P17096 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.92■□□□□ 0.14
HMGA1P17096 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA1P17096 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.92■□□□□ 0.14
HMGA1P17096 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HMGA1P17096 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HMGA1P17096 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGA1P17096 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.91■□□□□ 0.14
HMGA1P17096 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA1P17096 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.91■□□□□ 0.14
HMGA1P17096 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HMGA1P17096 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms