Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.72□□□□□ -0.37
DEFA4P12838 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.72□□□□□ -0.37
DEFA4P12838 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 AC011477.6-201ENST00000604980 1927 ntBASIC12.72□□□□□ -0.37
DEFA4P12838 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
DEFA4P12838 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
DEFA4P12838 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.72□□□□□ -0.37
DEFA4P12838 C18orf15-201ENST00000623680 2534 ntBASIC12.71□□□□□ -0.37
DEFA4P12838 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.71□□□□□ -0.37
DEFA4P12838 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.71□□□□□ -0.37
DEFA4P12838 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.71□□□□□ -0.37
DEFA4P12838 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
DEFA4P12838 AC105250.1-201ENST00000509378 2057 ntBASIC12.71□□□□□ -0.37
DEFA4P12838 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
DEFA4P12838 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.71□□□□□ -0.37
DEFA4P12838 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
DEFA4P12838 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
DEFA4P12838 AC004832.2-201ENST00000426397 482 ntBASIC12.71□□□□□ -0.37
DEFA4P12838 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.71□□□□□ -0.37
DEFA4P12838 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.71□□□□□ -0.37
DEFA4P12838 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.71□□□□□ -0.37
DEFA4P12838 AC092902.6-201ENST00000641783 218 ntBASIC12.71□□□□□ -0.37
DEFA4P12838 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DEFA4P12838 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.71□□□□□ -0.38
DEFA4P12838 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.71□□□□□ -0.38
DEFA4P12838 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DEFA4P12838 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DEFA4P12838 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DEFA4P12838 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DEFA4P12838 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.71□□□□□ -0.38
DEFA4P12838 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
DEFA4P12838 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.71□□□□□ -0.38
DEFA4P12838 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DEFA4P12838 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.71□□□□□ -0.38
DEFA4P12838 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
DEFA4P12838 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DEFA4P12838 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.71□□□□□ -0.38
DEFA4P12838 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
DEFA4P12838 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
DEFA4P12838 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 AC112693.3-201ENST00000624819 1983 ntBASIC12.7□□□□□ -0.38
DEFA4P12838 AC134407.2-201ENST00000625089 1978 ntBASIC12.7□□□□□ -0.38
DEFA4P12838 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
DEFA4P12838 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
DEFA4P12838 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
DEFA4P12838 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.7□□□□□ -0.38
DEFA4P12838 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.7□□□□□ -0.38
DEFA4P12838 MKNK2P1-201ENST00000437526 628 ntBASIC12.7□□□□□ -0.38
DEFA4P12838 DNAJB3-201ENST00000446806 729 ntBASIC12.7□□□□□ -0.38
DEFA4P12838 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms