Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT3P12035 AL512638.1-201ENST00000457493 794 ntBASIC16.4■□□□□ 0.22
KRT3P12035 AC004890.2-204ENST00000481968 304 ntBASIC16.4■□□□□ 0.22
KRT3P12035 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
KRT3P12035 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT3P12035 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT3P12035 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT3P12035 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT3P12035 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT3P12035 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT3P12035 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KRT3P12035 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KRT3P12035 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
KRT3P12035 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 AC023024.2-201ENST00000623561 1993 ntBASIC16.4■□□□□ 0.22
KRT3P12035 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 AC006058.4-201ENST00000624016 1670 ntBASIC16.4■□□□□ 0.22
KRT3P12035 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
KRT3P12035 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KRT3P12035 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT3P12035 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
KRT3P12035 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
KRT3P12035 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
KRT3P12035 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
KRT3P12035 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
KRT3P12035 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 AC091951.1-201ENST00000512854 2465 ntBASIC16.39■□□□□ 0.21
KRT3P12035 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT3P12035 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT3P12035 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT3P12035 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT3P12035 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.39■□□□□ 0.21
KRT3P12035 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.39■□□□□ 0.21
KRT3P12035 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT3P12035 KRT18P43-201ENST00000469825 1281 ntBASIC16.39■□□□□ 0.21
KRT3P12035 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT3P12035 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.39■□□□□ 0.21
KRT3P12035 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT3P12035 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KRT3P12035 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.39■□□□□ 0.21
KRT3P12035 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT3P12035 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT3P12035 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT3P12035 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT3P12035 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 AL121723.1-201ENST00000445194 1519 ntBASIC16.39■□□□□ 0.21
KRT3P12035 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
KRT3P12035 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT3P12035 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
KRT3P12035 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT3P12035 AC022144.1-201ENST00000602255 1580 ntBASIC16.38■□□□□ 0.21
KRT3P12035 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KRT3P12035 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT3P12035 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
KRT3P12035 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT3P12035 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 BASP1P1-201ENST00000430708 665 ntBASIC16.38■□□□□ 0.21
KRT3P12035 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT3P12035 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT3P12035 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT3P12035 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT3P12035 AC092337.1-201ENST00000568699 1129 ntBASIC16.38■□□□□ 0.21
KRT3P12035 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
KRT3P12035 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT3P12035 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT3P12035 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT3P12035 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
KRT3P12035 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT3P12035 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
KRT3P12035 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT3P12035 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.37■□□□□ 0.21
KRT3P12035 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT3P12035 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
KRT3P12035 CICP11-201ENST00000434745 2827 ntBASIC16.37■□□□□ 0.21
KRT3P12035 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
KRT3P12035 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms