Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MTHFD1P11586 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MTHFD1P11586 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MTHFD1P11586 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.42■□□□□ 0.06
MTHFD1P11586 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MTHFD1P11586 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MTHFD1P11586 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
MTHFD1P11586 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MTHFD1P11586 FLJ16779-201ENST00000612722 7638 ntBASIC15.42■□□□□ 0.06
MTHFD1P11586 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
MTHFD1P11586 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.41■□□□□ 0.06
MTHFD1P11586 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MTHFD1P11586 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.41■□□□□ 0.06
MTHFD1P11586 AL607033.1-201ENST00000623900 1599 ntBASIC15.41■□□□□ 0.06
MTHFD1P11586 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.41■□□□□ 0.06
MTHFD1P11586 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
MTHFD1P11586 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MTHFD1P11586 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.41■□□□□ 0.06
MTHFD1P11586 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MTHFD1P11586 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.41■□□□□ 0.06
MTHFD1P11586 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.41■□□□□ 0.06
MTHFD1P11586 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.41■□□□□ 0.06
MTHFD1P11586 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 MEIS3P1-201ENST00000495167 958 ntBASIC15.41■□□□□ 0.06
MTHFD1P11586 SLED1-202ENST00000512051 380 ntBASIC15.41■□□□□ 0.06
MTHFD1P11586 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.41■□□□□ 0.06
MTHFD1P11586 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
MTHFD1P11586 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.41■□□□□ 0.06
MTHFD1P11586 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.41■□□□□ 0.06
MTHFD1P11586 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MTHFD1P11586 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.4■□□□□ 0.06
MTHFD1P11586 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 AL009178.2-201ENST00000597278 2719 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
MTHFD1P11586 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MTHFD1P11586 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.4■□□□□ 0.06
MTHFD1P11586 MEP1AP4-201ENST00000423244 1087 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 AL353779.1-201ENST00000434793 351 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 COX20P2-201ENST00000452636 358 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.4■□□□□ 0.06
MTHFD1P11586 AC055876.2-201ENST00000531834 546 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.4■□□□□ 0.06
MTHFD1P11586 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MTHFD1P11586 AC023310.3-201ENST00000557027 670 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 AC100756.1-201ENST00000562736 682 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 AC138749.3-201ENST00000567691 622 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 AC116165.1-201ENST00000611806 668 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 AF228730.6-201ENST00000641497 218 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 AC084121.3-201ENST00000641716 218 ntBASIC15.4■□□□□ 0.06
MTHFD1P11586 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MTHFD1P11586 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.4■□□□□ 0.06
MTHFD1P11586 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.4■□□□□ 0.06
MTHFD1P11586 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MTHFD1P11586 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.4■□□□□ 0.06
MTHFD1P11586 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MTHFD1P11586 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.4■□□□□ 0.06
MTHFD1P11586 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MTHFD1P11586 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms