Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 OR2I1P-209ENST00000641730 5365 ntBASIC12.18□□□□□ -0.46
CD28P10747 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CD28P10747 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.18□□□□□ -0.46
CD28P10747 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CD28P10747 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.18□□□□□ -0.46
CD28P10747 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 MSTO2P-201ENST00000314835 1709 ntBASIC12.17□□□□□ -0.46
CD28P10747 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 AC134312.5-201ENST00000568031 1313 ntBASIC12.17□□□□□ -0.46
CD28P10747 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.17□□□□□ -0.46
CD28P10747 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CD28P10747 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CD28P10747 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CD28P10747 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 BAATP1-201ENST00000412284 1225 ntBASIC12.17□□□□□ -0.46
CD28P10747 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CD28P10747 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.17□□□□□ -0.46
CD28P10747 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.17□□□□□ -0.46
CD28P10747 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.17□□□□□ -0.46
CD28P10747 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CD28P10747 AC005252.2-201ENST00000624630 1141 ntBASIC12.17□□□□□ -0.46
CD28P10747 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 LINC02199-201ENST00000506655 2702 ntBASIC12.17□□□□□ -0.46
CD28P10747 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.17□□□□□ -0.46
CD28P10747 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CD28P10747 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CD28P10747 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD28P10747 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.17□□□□□ -0.46
CD28P10747 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.17□□□□□ -0.46
CD28P10747 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CD28P10747 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.17□□□□□ -0.46
CD28P10747 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.16□□□□□ -0.46
CD28P10747 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.16□□□□□ -0.46
CD28P10747 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.16□□□□□ -0.46
CD28P10747 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.16□□□□□ -0.46
CD28P10747 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 FAM86MP-201ENST00000340703 885 ntBASIC12.16□□□□□ -0.46
CD28P10747 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 AC099336.1-201ENST00000417053 1171 ntBASIC12.16□□□□□ -0.46
CD28P10747 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.16□□□□□ -0.46
CD28P10747 AC007551.1-201ENST00000457394 519 ntBASIC12.16□□□□□ -0.46
CD28P10747 AC093433.1-201ENST00000458048 571 ntBASIC12.16□□□□□ -0.46
CD28P10747 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.16□□□□□ -0.46
CD28P10747 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.16□□□□□ -0.46
CD28P10747 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CD28P10747 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.16□□□□□ -0.46
CD28P10747 AP001063.1-201ENST00000568332 529 ntBASIC12.16□□□□□ -0.46
CD28P10747 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CD28P10747 AC000095.1-201ENST00000603208 874 ntBASIC12.16□□□□□ -0.46
CD28P10747 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.16□□□□□ -0.46
CD28P10747 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD28P10747 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms