Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMIGD3P0DMS9 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TMIGD3P0DMS9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMIGD3P0DMS9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TMIGD3P0DMS9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMIGD3P0DMS9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 PKD1P5-201ENST00000532415 10291 ntBASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 OR8S1-201ENST00000310194 1080 ntBASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 AL512384.1-201ENST00000406683 331 ntBASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 GIMAP3P-201ENST00000495150 836 ntBASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 RARRES2P5-201ENST00000564013 466 ntBASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 LINC01115-203ENST00000606068 577 ntBASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TMIGD3P0DMS9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 CICP13-201ENST00000422015 2789 ntBASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 ELK1P1-201ENST00000485699 580 ntBASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TMIGD3P0DMS9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms