Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UBCP0CG48 ZBED1P1-201ENST00000502364 1930 ntBASIC13.69□□□□□ -0.22
UBCP0CG48 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UBCP0CG48 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.69□□□□□ -0.22
UBCP0CG48 MKNK2P1-201ENST00000437526 628 ntBASIC13.69□□□□□ -0.22
UBCP0CG48 AL592309.1-201ENST00000443127 649 ntBASIC13.69□□□□□ -0.22
UBCP0CG48 FDX1P1-201ENST00000449115 551 ntBASIC13.69□□□□□ -0.22
UBCP0CG48 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.69□□□□□ -0.22
UBCP0CG48 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.69□□□□□ -0.22
UBCP0CG48 C20orf181-201ENST00000623918 480 ntBASIC13.69□□□□□ -0.22
UBCP0CG48 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UBCP0CG48 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.69□□□□□ -0.22
UBCP0CG48 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
UBCP0CG48 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 WASH3P-207ENST00000560956 1394 ntBASIC13.69□□□□□ -0.22
UBCP0CG48 FO538757.1-201ENST00000623083 1397 ntBASIC13.69□□□□□ -0.22
UBCP0CG48 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.69□□□□□ -0.22
UBCP0CG48 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBCP0CG48 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
UBCP0CG48 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBCP0CG48 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.69□□□□□ -0.22
UBCP0CG48 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBCP0CG48 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.68□□□□□ -0.22
UBCP0CG48 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
UBCP0CG48 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.68□□□□□ -0.22
UBCP0CG48 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UBCP0CG48 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.68□□□□□ -0.22
UBCP0CG48 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 AC069335.1-201ENST00000489972 472 ntBASIC13.68□□□□□ -0.22
UBCP0CG48 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
UBCP0CG48 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
UBCP0CG48 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
UBCP0CG48 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
UBCP0CG48 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.68□□□□□ -0.22
UBCP0CG48 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBCP0CG48 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
UBCP0CG48 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.67□□□□□ -0.22
UBCP0CG48 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBCP0CG48 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBCP0CG48 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
UBCP0CG48 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 AC232323.1-201ENST00000540724 2099 ntBASIC13.67□□□□□ -0.22
UBCP0CG48 REXO1L5P-201ENST00000622260 2098 ntBASIC13.67□□□□□ -0.22
UBCP0CG48 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
UBCP0CG48 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.67□□□□□ -0.22
UBCP0CG48 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBCP0CG48 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms