Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 BANF1P1-201ENST00000553684 263 ntBASIC16.88■□□□□ 0.29
CCDC172P0C7W6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 AC026150.2-201ENST00000564693 1156 ntBASIC16.88■□□□□ 0.29
CCDC172P0C7W6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 AL671883.3-201ENST00000603274 991 ntBASIC16.88■□□□□ 0.29
CCDC172P0C7W6 AC009093.7-201ENST00000623853 1223 ntBASIC16.88■□□□□ 0.29
CCDC172P0C7W6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 AC026748.1-201ENST00000624349 3251 ntBASIC16.88■□□□□ 0.29
CCDC172P0C7W6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC172P0C7W6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 SPDYE14P-201ENST00000442619 822 ntBASIC16.87■□□□□ 0.29
CCDC172P0C7W6 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 AC093520.2-201ENST00000561830 333 ntBASIC16.87■□□□□ 0.29
CCDC172P0C7W6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC172P0C7W6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.86■□□□□ 0.29
CCDC172P0C7W6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC172P0C7W6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms