Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CYP3A4P08684 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CYP3A4P08684 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CYP3A4P08684 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CYP3A4P08684 AC016694.1-201ENST00000434179 700 ntBASIC17.32■□□□□ 0.36
CYP3A4P08684 EIF3FP3-201ENST00000434851 1086 ntBASIC17.32■□□□□ 0.36
CYP3A4P08684 AC022210.1-201ENST00000449856 793 ntBASIC17.32■□□□□ 0.36
CYP3A4P08684 AC007551.1-201ENST00000457394 519 ntBASIC17.32■□□□□ 0.36
CYP3A4P08684 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.32■□□□□ 0.36
CYP3A4P08684 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.32■□□□□ 0.36
CYP3A4P08684 AP000812.2-201ENST00000538934 718 ntBASIC17.32■□□□□ 0.36
CYP3A4P08684 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.32■□□□□ 0.36
CYP3A4P08684 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.32■□□□□ 0.36
CYP3A4P08684 AC132938.4-201ENST00000623835 848 ntBASIC17.32■□□□□ 0.36
CYP3A4P08684 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.32■□□□□ 0.36
CYP3A4P08684 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.32■□□□□ 0.36
CYP3A4P08684 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.32■□□□□ 0.36
CYP3A4P08684 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.32■□□□□ 0.36
CYP3A4P08684 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CYP3A4P08684 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CYP3A4P08684 PDIA3P1-201ENST00000471856 1510 ntBASIC17.31■□□□□ 0.36
CYP3A4P08684 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.31■□□□□ 0.36
CYP3A4P08684 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.31■□□□□ 0.36
CYP3A4P08684 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.31■□□□□ 0.36
CYP3A4P08684 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.31■□□□□ 0.36
CYP3A4P08684 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 CICP6-201ENST00000457191 2729 ntBASIC17.31■□□□□ 0.36
CYP3A4P08684 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.31■□□□□ 0.36
CYP3A4P08684 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.31■□□□□ 0.36
CYP3A4P08684 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 MST1L-201ENST00000442552 2185 ntBASIC17.31■□□□□ 0.36
CYP3A4P08684 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CYP3A4P08684 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CYP3A4P08684 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CYP3A4P08684 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 AC234783.1-201ENST00000441761 496 ntBASIC17.31■□□□□ 0.36
CYP3A4P08684 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.31■□□□□ 0.36
CYP3A4P08684 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CYP3A4P08684 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CYP3A4P08684 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.31■□□□□ 0.36
CYP3A4P08684 AC022616.1-201ENST00000518688 554 ntBASIC17.31■□□□□ 0.36
CYP3A4P08684 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.31■□□□□ 0.36
CYP3A4P08684 IGHV3-71-201ENST00000523324 359 ntBASIC17.31■□□□□ 0.36
CYP3A4P08684 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CYP3A4P08684 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.31■□□□□ 0.36
CYP3A4P08684 AL109954.1-202ENST00000564051 2148 ntBASIC17.31■□□□□ 0.36
CYP3A4P08684 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.31■□□□□ 0.36
CYP3A4P08684 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
CYP3A4P08684 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.31■□□□□ 0.36
CYP3A4P08684 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.31■□□□□ 0.36
CYP3A4P08684 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CYP3A4P08684 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.31■□□□□ 0.36
CYP3A4P08684 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CYP3A4P08684 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CYP3A4P08684 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 REXO1L5P-201ENST00000622260 2098 ntBASIC17.3■□□□□ 0.36
CYP3A4P08684 WASH3P-207ENST00000560956 1394 ntBASIC17.3■□□□□ 0.36
CYP3A4P08684 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.3■□□□□ 0.36
CYP3A4P08684 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CYP3A4P08684 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CYP3A4P08684 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms