Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CAPN1P07384 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CAPN1P07384 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CAPN1P07384 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CAPN1P07384 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.36■□□□□ 0.05
CAPN1P07384 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 AL080243.2-201ENST00000418783 582 ntBASIC15.36■□□□□ 0.05
CAPN1P07384 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 EEF1DP4-201ENST00000446006 880 ntBASIC15.36■□□□□ 0.05
CAPN1P07384 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.36■□□□□ 0.05
CAPN1P07384 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.36■□□□□ 0.05
CAPN1P07384 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.36■□□□□ 0.05
CAPN1P07384 AL079307.3-201ENST00000556114 283 ntBASIC15.36■□□□□ 0.05
CAPN1P07384 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
CAPN1P07384 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CAPN1P07384 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.36■□□□□ 0.05
CAPN1P07384 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.36■□□□□ 0.05
CAPN1P07384 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.35■□□□□ 0.05
CAPN1P07384 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CAPN1P07384 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CAPN1P07384 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CAPN1P07384 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.35■□□□□ 0.05
CAPN1P07384 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.35■□□□□ 0.05
CAPN1P07384 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 SPTLC1P1-201ENST00000447199 261 ntBASIC15.35■□□□□ 0.05
CAPN1P07384 CRB3P1-201ENST00000449338 276 ntBASIC15.35■□□□□ 0.05
CAPN1P07384 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.35■□□□□ 0.05
CAPN1P07384 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 AC239800.4-201ENST00000603712 296 ntBASIC15.35■□□□□ 0.05
CAPN1P07384 AC008738.7-201ENST00000609744 511 ntBASIC15.35■□□□□ 0.05
CAPN1P07384 AC009118.2-201ENST00000613275 655 ntBASIC15.35■□□□□ 0.05
CAPN1P07384 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CAPN1P07384 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CAPN1P07384 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CAPN1P07384 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.35■□□□□ 0.05
CAPN1P07384 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.35■□□□□ 0.05
CAPN1P07384 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CAPN1P07384 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CAPN1P07384 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CAPN1P07384 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms