Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 TUBB8P12-201ENST00000308911 1335 ntBASIC16.32■□□□□ 0.2
LMNAP02545 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LMNAP02545 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.32■□□□□ 0.2
LMNAP02545 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.32■□□□□ 0.2
LMNAP02545 TUBB7P-202ENST00000428444 1305 ntBASIC16.32■□□□□ 0.2
LMNAP02545 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.32■□□□□ 0.2
LMNAP02545 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.32■□□□□ 0.2
LMNAP02545 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.32■□□□□ 0.2
LMNAP02545 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.32■□□□□ 0.2
LMNAP02545 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.32■□□□□ 0.2
LMNAP02545 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.32■□□□□ 0.2
LMNAP02545 TUBB8P7-204ENST00000567960 1332 ntBASIC16.32■□□□□ 0.2
LMNAP02545 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.32■□□□□ 0.2
LMNAP02545 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.32■□□□□ 0.2
LMNAP02545 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LMNAP02545 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.32■□□□□ 0.2
LMNAP02545 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.32■□□□□ 0.2
LMNAP02545 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LMNAP02545 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LMNAP02545 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LMNAP02545 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.31■□□□□ 0.2
LMNAP02545 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.31■□□□□ 0.2
LMNAP02545 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.31■□□□□ 0.2
LMNAP02545 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LMNAP02545 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 CSF2RBP1-201ENST00000447905 391 ntBASIC16.31■□□□□ 0.2
LMNAP02545 FO681548.1-201ENST00000455617 1132 ntBASIC16.31■□□□□ 0.2
LMNAP02545 AC104596.2-201ENST00000512793 793 ntBASIC16.31■□□□□ 0.2
LMNAP02545 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LMNAP02545 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.31■□□□□ 0.2
LMNAP02545 AL033527.5-202ENST00000641632 1098 ntBASIC16.31■□□□□ 0.2
LMNAP02545 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LMNAP02545 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.31■□□□□ 0.2
LMNAP02545 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.31■□□□□ 0.2
LMNAP02545 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LMNAP02545 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.31■□□□□ 0.2
LMNAP02545 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.31■□□□□ 0.2
LMNAP02545 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LMNAP02545 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 LINC00895-201ENST00000629028 1637 ntBASIC16.3■□□□□ 0.2
LMNAP02545 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LMNAP02545 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.3■□□□□ 0.2
LMNAP02545 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.3■□□□□ 0.2
LMNAP02545 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.3■□□□□ 0.2
LMNAP02545 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.3■□□□□ 0.2
LMNAP02545 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LMNAP02545 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.3■□□□□ 0.2
LMNAP02545 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.3■□□□□ 0.2
LMNAP02545 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.3■□□□□ 0.2
LMNAP02545 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LMNAP02545 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.3■□□□□ 0.2
LMNAP02545 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.3■□□□□ 0.2
LMNAP02545 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms