Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 AC104596.2-201ENST00000512793 793 ntBASIC16.67■□□□□ 0.26
HLA-DRAP01903 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 AL645728.2-202ENST00000641679 227 ntBASIC16.67■□□□□ 0.26
HLA-DRAP01903 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DRAP01903 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.67■□□□□ 0.26
HLA-DRAP01903 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 DBET-201ENST00000630918 3363 ntBASIC16.66■□□□□ 0.26
HLA-DRAP01903 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 GHSR-202ENST00000427970 912 ntBASIC16.66■□□□□ 0.26
HLA-DRAP01903 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 MYCLP2-201ENST00000449268 967 ntBASIC16.66■□□□□ 0.26
HLA-DRAP01903 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 AC026410.3-201ENST00000514280 936 ntBASIC16.66■□□□□ 0.26
HLA-DRAP01903 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 AC107373.2-201ENST00000607735 490 ntBASIC16.66■□□□□ 0.26
HLA-DRAP01903 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HLA-DRAP01903 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HLA-DRAP01903 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 AC092552.1-201ENST00000547243 906 ntBASIC16.65■□□□□ 0.26
HLA-DRAP01903 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 WASH4P-201ENST00000564273 1246 ntBASIC16.65■□□□□ 0.26
HLA-DRAP01903 AC138761.1-201ENST00000584393 385 ntBASIC16.65■□□□□ 0.26
HLA-DRAP01903 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 AC008494.3-201ENST00000606615 944 ntBASIC16.65■□□□□ 0.26
HLA-DRAP01903 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms