Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PRSS30P-206ENST00000641773 873 ntBASIC17.05■□□□□ 0.32
CD4P01730 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.05■□□□□ 0.32
CD4P01730 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.05■□□□□ 0.32
CD4P01730 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD4P01730 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.05■□□□□ 0.32
CD4P01730 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CD4P01730 AC148477.4-201ENST00000613430 1793 ntBASIC17.05■□□□□ 0.32
CD4P01730 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD4P01730 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CD4P01730 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD4P01730 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD4P01730 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD4P01730 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD4P01730 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.04■□□□□ 0.32
CD4P01730 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.04■□□□□ 0.32
CD4P01730 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.04■□□□□ 0.32
CD4P01730 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD4P01730 TPM3P8-201ENST00000330554 643 ntBASIC17.04■□□□□ 0.32
CD4P01730 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.04■□□□□ 0.32
CD4P01730 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD4P01730 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.04■□□□□ 0.32
CD4P01730 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.04■□□□□ 0.32
CD4P01730 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.04■□□□□ 0.32
CD4P01730 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.04■□□□□ 0.32
CD4P01730 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.04■□□□□ 0.32
CD4P01730 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.04■□□□□ 0.32
CD4P01730 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD4P01730 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.04■□□□□ 0.32
CD4P01730 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.04■□□□□ 0.32
CD4P01730 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD4P01730 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.04■□□□□ 0.32
CD4P01730 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.04■□□□□ 0.32
CD4P01730 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.04■□□□□ 0.32
CD4P01730 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.04■□□□□ 0.32
CD4P01730 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD4P01730 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CD4P01730 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CD4P01730 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.04■□□□□ 0.32
CD4P01730 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CD4P01730 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CD4P01730 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD4P01730 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.03■□□□□ 0.32
CD4P01730 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD4P01730 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 AC112504.1-201ENST00000623415 1841 ntBASIC17.03■□□□□ 0.32
CD4P01730 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD4P01730 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.03■□□□□ 0.32
CD4P01730 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CD4P01730 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD4P01730 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD4P01730 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.03■□□□□ 0.32
CD4P01730 FXNP2-201ENST00000411625 547 ntBASIC17.03■□□□□ 0.32
CD4P01730 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.03■□□□□ 0.32
CD4P01730 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.03■□□□□ 0.32
CD4P01730 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.03■□□□□ 0.32
CD4P01730 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 MIR4313-201ENST00000580760 101 ntBASIC17.03■□□□□ 0.32
CD4P01730 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.03■□□□□ 0.32
CD4P01730 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.03■□□□□ 0.32
CD4P01730 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.03■□□□□ 0.32
CD4P01730 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.03■□□□□ 0.32
CD4P01730 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CD4P01730 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 AL139384.1-201ENST00000612143 3047 ntBASIC17.03■□□□□ 0.32
CD4P01730 AL603832.2-201ENST00000566195 2125 ntBASIC17.03■□□□□ 0.32
CD4P01730 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CD4P01730 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
CD4P01730 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CD4P01730 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD4P01730 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CD4P01730 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.02■□□□□ 0.32
CD4P01730 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD4P01730 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms