Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFBP01127 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.38■□□□□ 0.05
PDGFBP01127 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.38■□□□□ 0.05
PDGFBP01127 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.38■□□□□ 0.05
PDGFBP01127 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.38■□□□□ 0.05
PDGFBP01127 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
PDGFBP01127 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PDGFBP01127 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.38■□□□□ 0.05
PDGFBP01127 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.38■□□□□ 0.05
PDGFBP01127 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFBP01127 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFBP01127 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFBP01127 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFBP01127 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.38■□□□□ 0.05
PDGFBP01127 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFBP01127 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.38■□□□□ 0.05
PDGFBP01127 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFBP01127 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFBP01127 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDGFBP01127 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFBP01127 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFBP01127 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PDGFBP01127 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDGFBP01127 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PDGFBP01127 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
PDGFBP01127 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.37■□□□□ 0.05
PDGFBP01127 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.37■□□□□ 0.05
PDGFBP01127 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.37■□□□□ 0.05
PDGFBP01127 ALG1L13P-202ENST00000519320 584 ntBASIC15.37■□□□□ 0.05
PDGFBP01127 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.37■□□□□ 0.05
PDGFBP01127 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFBP01127 RPL17P45-201ENST00000586289 509 ntBASIC15.37■□□□□ 0.05
PDGFBP01127 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDGFBP01127 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.37■□□□□ 0.05
PDGFBP01127 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PDGFBP01127 NOC2LP2-201ENST00000407594 1944 ntBASIC15.37■□□□□ 0.05
PDGFBP01127 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDGFBP01127 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.36■□□□□ 0.05
PDGFBP01127 AC055811.4-201ENST00000624039 1754 ntBASIC15.36■□□□□ 0.05
PDGFBP01127 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PDGFBP01127 AL645937.2-201ENST00000396808 931 ntBASIC15.36■□□□□ 0.05
PDGFBP01127 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.36■□□□□ 0.05
PDGFBP01127 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
PDGFBP01127 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.36■□□□□ 0.05
PDGFBP01127 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.36■□□□□ 0.05
PDGFBP01127 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.36■□□□□ 0.05
PDGFBP01127 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.36■□□□□ 0.05
PDGFBP01127 AL031713.1-201ENST00000564813 661 ntBASIC15.36■□□□□ 0.05
PDGFBP01127 AC026803.1-201ENST00000569130 274 ntBASIC15.36■□□□□ 0.05
PDGFBP01127 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.36■□□□□ 0.05
PDGFBP01127 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.36■□□□□ 0.05
PDGFBP01127 AL109837.1-201ENST00000603272 613 ntBASIC15.36■□□□□ 0.05
PDGFBP01127 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.36■□□□□ 0.05
PDGFBP01127 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDGFBP01127 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.36■□□□□ 0.05
PDGFBP01127 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms