Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.06■□□□□ 0.8
LTN1O94822 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LTN1O94822 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.06■□□□□ 0.8
LTN1O94822 ISCA2P1-201ENST00000425548 448 ntBASIC20.06■□□□□ 0.8
LTN1O94822 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC20.06■□□□□ 0.8
LTN1O94822 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.06■□□□□ 0.8
LTN1O94822 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC20.06■□□□□ 0.8
LTN1O94822 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.06■□□□□ 0.8
LTN1O94822 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.06■□□□□ 0.8
LTN1O94822 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.06■□□□□ 0.8
LTN1O94822 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.06■□□□□ 0.8
LTN1O94822 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LTN1O94822 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 AC112693.3-201ENST00000624819 1983 ntBASIC20.06■□□□□ 0.8
LTN1O94822 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.06■□□□□ 0.8
LTN1O94822 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 AL360270.3-201ENST00000609118 1348 ntBASIC20.06■□□□□ 0.8
LTN1O94822 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.06■□□□□ 0.8
LTN1O94822 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.06■□□□□ 0.8
LTN1O94822 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.06■□□□□ 0.8
LTN1O94822 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LTN1O94822 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC20.06■□□□□ 0.8
LTN1O94822 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC20.06■□□□□ 0.8
LTN1O94822 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.06■□□□□ 0.8
LTN1O94822 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.06■□□□□ 0.8
LTN1O94822 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC20.06■□□□□ 0.8
LTN1O94822 AL132994.2-201ENST00000603120 687 ntBASIC20.06■□□□□ 0.8
LTN1O94822 U62317.3-201ENST00000608319 855 ntBASIC20.06■□□□□ 0.8
LTN1O94822 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.06■□□□□ 0.8
LTN1O94822 AC004923.1-202ENST00000642106 209 ntBASIC20.06■□□□□ 0.8
LTN1O94822 AC023090.2-201ENST00000625182 2110 ntBASIC20.05■□□□□ 0.8
LTN1O94822 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LTN1O94822 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LTN1O94822 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LTN1O94822 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LTN1O94822 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.05■□□□□ 0.8
LTN1O94822 AC087481.3-201ENST00000602886 1894 ntBASIC20.05■□□□□ 0.8
LTN1O94822 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LTN1O94822 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.05■□□□□ 0.8
LTN1O94822 AL118508.1-201ENST00000613502 2345 ntBASIC20.05■□□□□ 0.8
LTN1O94822 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LTN1O94822 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.05■□□□□ 0.8
LTN1O94822 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LTN1O94822 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LTN1O94822 TLE1P1-201ENST00000422965 589 ntBASIC20.05■□□□□ 0.8
LTN1O94822 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC20.05■□□□□ 0.8
LTN1O94822 AC069218.1-201ENST00000435269 762 ntBASIC20.05■□□□□ 0.8
LTN1O94822 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LTN1O94822 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LTN1O94822 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LTN1O94822 AC012508.2-201ENST00000567613 1472 ntBASIC20.04■□□□□ 0.8
LTN1O94822 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LTN1O94822 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LTN1O94822 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.04■□□□□ 0.8
LTN1O94822 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC20.04■□□□□ 0.8
LTN1O94822 AL157407.1-201ENST00000435784 904 ntBASIC20.04■□□□□ 0.8
LTN1O94822 MAGEA5-201ENST00000446757 942 ntBASIC20.04■□□□□ 0.8
LTN1O94822 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC20.04■□□□□ 0.8
LTN1O94822 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.04■□□□□ 0.8
LTN1O94822 STUB1-204ENST00000564370 875 ntTSL 2 BASIC20.04■□□□□ 0.8
LTN1O94822 DUX4L46-201ENST00000566845 751 ntBASIC20.04■□□□□ 0.8
LTN1O94822 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 MIR5572-201ENST00000583188 137 ntBASIC20.04■□□□□ 0.8
LTN1O94822 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.04■□□□□ 0.8
LTN1O94822 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC20.04■□□□□ 0.8
LTN1O94822 AL157791.1-201ENST00000553667 1699 ntBASIC20.04■□□□□ 0.8
LTN1O94822 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.04■□□□□ 0.8
LTN1O94822 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LTN1O94822 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.04■□□□□ 0.8
LTN1O94822 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.04■□□□□ 0.8
LTN1O94822 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC20.03■□□□□ 0.8
LTN1O94822 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.03■□□□□ 0.8
LTN1O94822 LDHBP1-201ENST00000455730 1119 ntBASIC20.03■□□□□ 0.8
LTN1O94822 TUBB8P8-201ENST00000458717 1058 ntBASIC20.03■□□□□ 0.8
LTN1O94822 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.03■□□□□ 0.8
LTN1O94822 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.03■□□□□ 0.8
LTN1O94822 AP003419.4-201ENST00000616071 517 ntBASIC20.03■□□□□ 0.8
LTN1O94822 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.03■□□□□ 0.8
LTN1O94822 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LTN1O94822 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms