Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF253O75346 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF253O75346 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.19□□□□□ -0.46
ZNF253O75346 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 MIR7706-201ENST00000613747 67 ntBASIC12.19□□□□□ -0.46
ZNF253O75346 AC148477.8-201ENST00000624298 468 ntBASIC12.19□□□□□ -0.46
ZNF253O75346 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.19□□□□□ -0.46
ZNF253O75346 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.19□□□□□ -0.46
ZNF253O75346 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ZNF253O75346 DMBT1P1-203ENST00000636837 4628 ntBASIC12.18□□□□□ -0.46
ZNF253O75346 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 AC090616.6-203ENST00000579186 1945 ntBASIC12.18□□□□□ -0.46
ZNF253O75346 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 AC004870.1-201ENST00000315132 882 ntBASIC12.18□□□□□ -0.46
ZNF253O75346 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.18□□□□□ -0.46
ZNF253O75346 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.18□□□□□ -0.46
ZNF253O75346 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 AL031284.1-201ENST00000419297 478 ntBASIC12.18□□□□□ -0.46
ZNF253O75346 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ZNF253O75346 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.18□□□□□ -0.46
ZNF253O75346 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
ZNF253O75346 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
ZNF253O75346 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms