Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 OR8S1-201ENST00000310194 1080 ntBASIC14.87□□□□□ -0.03
PRICKLE3O43900 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 GHSR-202ENST00000427970 912 ntBASIC14.87□□□□□ -0.03
PRICKLE3O43900 AL162726.2-201ENST00000438986 1017 ntBASIC14.87□□□□□ -0.03
PRICKLE3O43900 INE1-201ENST00000456273 945 ntBASIC14.87□□□□□ -0.03
PRICKLE3O43900 RN7SL752P-201ENST00000463779 287 ntBASIC14.87□□□□□ -0.03
PRICKLE3O43900 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 CLUHP6-201ENST00000580789 941 ntBASIC14.87□□□□□ -0.03
PRICKLE3O43900 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 AL359881.2-201ENST00000602973 570 ntBASIC14.87□□□□□ -0.03
PRICKLE3O43900 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 AC005252.2-201ENST00000624630 1141 ntBASIC14.87□□□□□ -0.03
PRICKLE3O43900 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PRICKLE3O43900 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PRICKLE3O43900 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 CICP11-201ENST00000434745 2827 ntBASIC14.86□□□□□ -0.03
PRICKLE3O43900 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 IGHV3-72-202ENST00000621503 303 ntBASIC14.86□□□□□ -0.03
PRICKLE3O43900 CU634019.7-201ENST00000624153 1185 ntBASIC14.86□□□□□ -0.03
PRICKLE3O43900 FP236241.2-201ENST00000624906 1185 ntBASIC14.86□□□□□ -0.03
PRICKLE3O43900 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PRICKLE3O43900 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.86□□□□□ -0.03
PRICKLE3O43900 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRICKLE3O43900 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 AC007787.1-201ENST00000588095 1583 ntBASIC14.85□□□□□ -0.03
PRICKLE3O43900 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRICKLE3O43900 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRICKLE3O43900 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRICKLE3O43900 AC013268.4-201ENST00000637413 2228 ntBASIC14.85□□□□□ -0.03
PRICKLE3O43900 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRICKLE3O43900 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRICKLE3O43900 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PRICKLE3O43900 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PRICKLE3O43900 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.85□□□□□ -0.03
PRICKLE3O43900 ACTG1P3-201ENST00000431775 1114 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms