Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2A1O14983 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
ATP2A1O14983 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
ATP2A1O14983 AL139094.1-201ENST00000405549 1188 ntBASIC17.69■□□□□ 0.42
ATP2A1O14983 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
ATP2A1O14983 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
ATP2A1O14983 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2A1O14983 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.69■□□□□ 0.42
ATP2A1O14983 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
ATP2A1O14983 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.69■□□□□ 0.42
ATP2A1O14983 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2A1O14983 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP2A1O14983 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ATP2A1O14983 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP2A1O14983 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2A1O14983 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP2A1O14983 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
ATP2A1O14983 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
ATP2A1O14983 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.69■□□□□ 0.42
ATP2A1O14983 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.69■□□□□ 0.42
ATP2A1O14983 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP2A1O14983 AC004066.1-201ENST00000502488 802 ntBASIC17.68■□□□□ 0.42
ATP2A1O14983 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ATP2A1O14983 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.68■□□□□ 0.42
ATP2A1O14983 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP2A1O14983 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.68■□□□□ 0.42
ATP2A1O14983 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.68■□□□□ 0.42
ATP2A1O14983 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 AC024909.3-201ENST00000611513 2257 ntBASIC17.68■□□□□ 0.42
ATP2A1O14983 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATP2A1O14983 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.68■□□□□ 0.42
ATP2A1O14983 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2A1O14983 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 DOC2GP-204ENST00000639052 2548 ntBASIC17.67■□□□□ 0.42
ATP2A1O14983 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.67■□□□□ 0.42
ATP2A1O14983 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATP2A1O14983 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATP2A1O14983 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.67■□□□□ 0.42
ATP2A1O14983 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATP2A1O14983 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATP2A1O14983 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATP2A1O14983 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ATP2A1O14983 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms