Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.4■□□□□ 0.06
TLR4O00206 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.4■□□□□ 0.06
TLR4O00206 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.4■□□□□ 0.06
TLR4O00206 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 AC022137.2-201ENST00000503482 481 ntBASIC15.4■□□□□ 0.06
TLR4O00206 AC106760.1-201ENST00000508690 800 ntBASIC15.4■□□□□ 0.06
TLR4O00206 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.4■□□□□ 0.06
TLR4O00206 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TLR4O00206 MIR6869-201ENST00000619434 62 ntBASIC15.4■□□□□ 0.06
TLR4O00206 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.4■□□□□ 0.06
TLR4O00206 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.4■□□□□ 0.06
TLR4O00206 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
TLR4O00206 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.39■□□□□ 0.05
TLR4O00206 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.39■□□□□ 0.05
TLR4O00206 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.39■□□□□ 0.05
TLR4O00206 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 C2orf27AP3-201ENST00000434123 579 ntBASIC15.39■□□□□ 0.05
TLR4O00206 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.39■□□□□ 0.05
TLR4O00206 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.39■□□□□ 0.05
TLR4O00206 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.39■□□□□ 0.05
TLR4O00206 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.39■□□□□ 0.05
TLR4O00206 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.39■□□□□ 0.05
TLR4O00206 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.39■□□□□ 0.05
TLR4O00206 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.39■□□□□ 0.05
TLR4O00206 AC244669.2-201ENST00000612320 853 ntBASIC15.39■□□□□ 0.05
TLR4O00206 AL354718.3-201ENST00000616414 581 ntBASIC15.39■□□□□ 0.05
TLR4O00206 CR382287.1-201ENST00000623954 586 ntBASIC15.39■□□□□ 0.05
TLR4O00206 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TLR4O00206 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TLR4O00206 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TLR4O00206 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TLR4O00206 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.38■□□□□ 0.05
TLR4O00206 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.38■□□□□ 0.05
TLR4O00206 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.38■□□□□ 0.05
TLR4O00206 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.38■□□□□ 0.05
TLR4O00206 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.38■□□□□ 0.05
TLR4O00206 YBX1P6-201ENST00000442962 1002 ntBASIC15.38■□□□□ 0.05
TLR4O00206 AP001582.1-201ENST00000525856 295 ntBASIC15.38■□□□□ 0.05
TLR4O00206 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.38■□□□□ 0.05
TLR4O00206 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TLR4O00206 AC107373.2-201ENST00000607735 490 ntBASIC15.38■□□□□ 0.05
TLR4O00206 RHOXF1P1-202ENST00000635473 501 ntBASIC15.38■□□□□ 0.05
TLR4O00206 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms