Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC196A0A1B0GTZ2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 TCAF2P1-201ENST00000291129 2421 ntBASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC087499.6-201ENST00000411576 835 ntBASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 RN7SL204P-201ENST00000582831 262 ntBASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC196A0A1B0GTZ2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 GHSR-202ENST00000427970 912 ntBASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 AL353779.1-201ENST00000434793 351 ntBASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC104596.2-201ENST00000512793 793 ntBASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 MIR4745-201ENST00000577608 62 ntBASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC023824.1-201ENST00000562945 2975 ntBASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC196A0A1B0GTZ2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC007541.1-201ENST00000570282 1469 ntBASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC002472.2-201ENST00000442739 958 ntBASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC196A0A1B0GTZ2 AC093726.1-201ENST00000608064 963 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms