Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COMMD3-BMI1R4GMX3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COMMD3-BMI1R4GMX3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.68■■□□□ 1.06
COMMD3-BMI1R4GMX3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COMMD3-BMI1R4GMX3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
COMMD3-BMI1R4GMX3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COMMD3-BMI1R4GMX3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.67■■□□□ 1.06
COMMD3-BMI1R4GMX3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.67■■□□□ 1.06
COMMD3-BMI1R4GMX3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.67■■□□□ 1.06
COMMD3-BMI1R4GMX3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COMMD3-BMI1R4GMX3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.67■■□□□ 1.06
COMMD3-BMI1R4GMX3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.67■■□□□ 1.06
COMMD3-BMI1R4GMX3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COMMD3-BMI1R4GMX3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.66■■□□□ 1.06
COMMD3-BMI1R4GMX3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 LINC00526-201ENST00000581067 1875 ntBASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 HLA-V-202ENST00000446817 847 ntBASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
COMMD3-BMI1R4GMX3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
COMMD3-BMI1R4GMX3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
COMMD3-BMI1R4GMX3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD3-BMI1R4GMX3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD3-BMI1R4GMX3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD3-BMI1R4GMX3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD3-BMI1R4GMX3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD3-BMI1R4GMX3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD3-BMI1R4GMX3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.64■■□□□ 1.05
COMMD3-BMI1R4GMX3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.64■■□□□ 1.05
COMMD3-BMI1R4GMX3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COMMD3-BMI1R4GMX3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
COMMD3-BMI1R4GMX3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COMMD3-BMI1R4GMX3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 CR559946.2-201ENST00000623684 991 ntBASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 DUSP8P3-201ENST00000399571 1760 ntBASIC21.61■■□□□ 1.05
COMMD3-BMI1R4GMX3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
COMMD3-BMI1R4GMX3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
COMMD3-BMI1R4GMX3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
COMMD3-BMI1R4GMX3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms