Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDHGB6Q9Y5F9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PCDHGB6Q9Y5F9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB6Q9Y5F9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHGB6Q9Y5F9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 AL592295.1-201ENST00000400984 884 ntBASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 KRT125P-201ENST00000546827 989 ntBASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 AC019069.1-201ENST00000610008 1333 ntBASIC21.8■■□□□ 1.08
PCDHGB6Q9Y5F9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 AL356441.2-201ENST00000443009 864 ntBASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 AC137630.3-201ENST00000607245 391 ntBASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHGB6Q9Y5F9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB6Q9Y5F9 AC096887.2-201ENST00000623443 1957 ntBASIC21.78■■□□□ 1.08
PCDHGB6Q9Y5F9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB6Q9Y5F9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB6Q9Y5F9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB6Q9Y5F9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHGB6Q9Y5F9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHGB6Q9Y5F9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 AC131212.1-201ENST00000613771 668 ntBASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHGB6Q9Y5F9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGB6Q9Y5F9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB6Q9Y5F9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB6Q9Y5F9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDHGB6Q9Y5F9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGB6Q9Y5F9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHGB6Q9Y5F9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHGB6Q9Y5F9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHGB6Q9Y5F9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 AC120024.1-201ENST00000562672 995 ntBASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 MIR4787-201ENST00000607364 84 ntBASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHGB6Q9Y5F9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB6Q9Y5F9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHGB6Q9Y5F9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGB6Q9Y5F9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGB6Q9Y5F9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB6Q9Y5F9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB6Q9Y5F9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB6Q9Y5F9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGB6Q9Y5F9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
PCDHGB6Q9Y5F9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGB6Q9Y5F9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGB6Q9Y5F9 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGB6Q9Y5F9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHGB6Q9Y5F9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGB6Q9Y5F9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms