Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
VPS16Q9H269 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.48■■□□□ 1.67
VPS16Q9H269 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
VPS16Q9H269 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
VPS16Q9H269 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
VPS16Q9H269 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
VPS16Q9H269 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
VPS16Q9H269 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VPS16Q9H269 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.47■■□□□ 1.67
VPS16Q9H269 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.47■■□□□ 1.67
VPS16Q9H269 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VPS16Q9H269 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
VPS16Q9H269 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VPS16Q9H269 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VPS16Q9H269 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.47■■□□□ 1.67
VPS16Q9H269 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.47■■□□□ 1.67
VPS16Q9H269 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS16Q9H269 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS16Q9H269 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS16Q9H269 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
VPS16Q9H269 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.46■■□□□ 1.67
VPS16Q9H269 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
VPS16Q9H269 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS16Q9H269 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS16Q9H269 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
VPS16Q9H269 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
VPS16Q9H269 RNF126P1-201ENST00000567452 1320 ntBASIC25.45■■□□□ 1.66
VPS16Q9H269 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
VPS16Q9H269 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
VPS16Q9H269 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
VPS16Q9H269 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
VPS16Q9H269 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.44■■□□□ 1.66
VPS16Q9H269 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
VPS16Q9H269 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
VPS16Q9H269 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
VPS16Q9H269 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
VPS16Q9H269 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.44■■□□□ 1.66
VPS16Q9H269 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
VPS16Q9H269 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.44■■□□□ 1.66
VPS16Q9H269 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
VPS16Q9H269 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
VPS16Q9H269 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.43■■□□□ 1.66
VPS16Q9H269 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
VPS16Q9H269 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
VPS16Q9H269 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.43■■□□□ 1.66
VPS16Q9H269 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS16Q9H269 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS16Q9H269 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
VPS16Q9H269 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.42■■□□□ 1.66
VPS16Q9H269 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
VPS16Q9H269 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.42■■□□□ 1.66
VPS16Q9H269 SPCS2P3-201ENST00000500401 656 ntBASIC25.42■■□□□ 1.66
VPS16Q9H269 AL592293.1-201ENST00000502889 1188 ntBASIC25.42■■□□□ 1.66
VPS16Q9H269 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
VPS16Q9H269 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.42■■□□□ 1.66
VPS16Q9H269 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.42■■□□□ 1.66
VPS16Q9H269 DUSP8P5-201ENST00000422884 1815 ntBASIC25.42■■□□□ 1.66
VPS16Q9H269 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
VPS16Q9H269 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.41■■□□□ 1.66
VPS16Q9H269 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS16Q9H269 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS16Q9H269 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS16Q9H269 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.41■■□□□ 1.66
VPS16Q9H269 RPS2P7-201ENST00000447334 885 ntBASIC25.41■■□□□ 1.66
VPS16Q9H269 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.41■■□□□ 1.66
VPS16Q9H269 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS16Q9H269 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
VPS16Q9H269 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
VPS16Q9H269 AC068473.5-201ENST00000616428 2072 ntBASIC25.41■■□□□ 1.66
VPS16Q9H269 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
VPS16Q9H269 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
VPS16Q9H269 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS16Q9H269 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS16Q9H269 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS16Q9H269 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
VPS16Q9H269 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
VPS16Q9H269 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.66
VPS16Q9H269 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.39■■□□□ 1.66
VPS16Q9H269 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
VPS16Q9H269 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.65
VPS16Q9H269 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
VPS16Q9H269 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
VPS16Q9H269 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.38■■□□□ 1.65
VPS16Q9H269 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.38■■□□□ 1.65
VPS16Q9H269 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS16Q9H269 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.37■■□□□ 1.65
VPS16Q9H269 AC018755.3-202ENST00000596210 929 ntBASIC25.37■■□□□ 1.65
VPS16Q9H269 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
VPS16Q9H269 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
VPS16Q9H269 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.36■■□□□ 1.65
VPS16Q9H269 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.35■■□□□ 1.65
VPS16Q9H269 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS16Q9H269 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS16Q9H269 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VPS16Q9H269 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VPS16Q9H269 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.35■■□□□ 1.65
VPS16Q9H269 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS16Q9H269 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.35■■□□□ 1.65
VPS16Q9H269 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VPS16Q9H269 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms