Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CCSER1Q9C0I3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CCSER1Q9C0I3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
CCSER1Q9C0I3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.1■■□□□ 1.77
CCSER1Q9C0I3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 AC004812.2-201ENST00000611079 2094 ntBASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CCSER1Q9C0I3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CCSER1Q9C0I3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CCSER1Q9C0I3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.08■■□□□ 1.77
CCSER1Q9C0I3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.08■■□□□ 1.77
CCSER1Q9C0I3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCSER1Q9C0I3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CCSER1Q9C0I3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.08■■□□□ 1.77
CCSER1Q9C0I3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCSER1Q9C0I3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CCSER1Q9C0I3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCSER1Q9C0I3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
CCSER1Q9C0I3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCSER1Q9C0I3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CCSER1Q9C0I3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.07■■□□□ 1.76
CCSER1Q9C0I3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCSER1Q9C0I3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.06■■□□□ 1.76
CCSER1Q9C0I3 MIR4508-201ENST00000584178 70 ntBASIC26.06■■□□□ 1.76
CCSER1Q9C0I3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CCSER1Q9C0I3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.06■■□□□ 1.76
CCSER1Q9C0I3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.06■■□□□ 1.76
CCSER1Q9C0I3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 KRT18P24-201ENST00000344739 1156 ntBASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 AC120024.1-201ENST00000562672 995 ntBASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CCSER1Q9C0I3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCSER1Q9C0I3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCSER1Q9C0I3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCSER1Q9C0I3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CCSER1Q9C0I3 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.04■■□□□ 1.76
CCSER1Q9C0I3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CCSER1Q9C0I3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.04■■□□□ 1.76
CCSER1Q9C0I3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.03■■□□□ 1.76
CCSER1Q9C0I3 AC103834.1-201ENST00000520383 144 ntBASIC26.03■■□□□ 1.76
CCSER1Q9C0I3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
CCSER1Q9C0I3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CCSER1Q9C0I3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
CCSER1Q9C0I3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCSER1Q9C0I3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CCSER1Q9C0I3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.02■■□□□ 1.76
CCSER1Q9C0I3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CCSER1Q9C0I3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
CCSER1Q9C0I3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CCSER1Q9C0I3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CCSER1Q9C0I3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCSER1Q9C0I3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCSER1Q9C0I3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.01■■□□□ 1.75
CCSER1Q9C0I3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CCSER1Q9C0I3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
CCSER1Q9C0I3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26■■□□□ 1.75
CCSER1Q9C0I3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26■■□□□ 1.75
CCSER1Q9C0I3 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CCSER1Q9C0I3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCSER1Q9C0I3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCSER1Q9C0I3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CCSER1Q9C0I3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.99■■□□□ 1.75
CCSER1Q9C0I3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CCSER1Q9C0I3 AL161729.1-201ENST00000604104 1402 ntBASIC25.98■■□□□ 1.75
CCSER1Q9C0I3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms