Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCRT1Q9BWW7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCRT1Q9BWW7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SCRT1Q9BWW7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SCRT1Q9BWW7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 SLC25A24-204ENST00000569674 2357 ntBASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 LINC00526-201ENST00000581067 1875 ntBASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.56■□□□□ 0.56
SCRT1Q9BWW7 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.55■□□□□ 0.56
SCRT1Q9BWW7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.55■□□□□ 0.56
SCRT1Q9BWW7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCRT1Q9BWW7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
SCRT1Q9BWW7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCRT1Q9BWW7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.55■□□□□ 0.56
SCRT1Q9BWW7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.55■□□□□ 0.56
SCRT1Q9BWW7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.55■□□□□ 0.56
SCRT1Q9BWW7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCRT1Q9BWW7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCRT1Q9BWW7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCRT1Q9BWW7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCRT1Q9BWW7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.52■□□□□ 0.56
SCRT1Q9BWW7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCRT1Q9BWW7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCRT1Q9BWW7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.52■□□□□ 0.56
SCRT1Q9BWW7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.52■□□□□ 0.56
SCRT1Q9BWW7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCRT1Q9BWW7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SCRT1Q9BWW7 AC127496.7-201ENST00000625110 1798 ntBASIC18.52■□□□□ 0.55
SCRT1Q9BWW7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SCRT1Q9BWW7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SCRT1Q9BWW7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SCRT1Q9BWW7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.52■□□□□ 0.55
SCRT1Q9BWW7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCRT1Q9BWW7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCRT1Q9BWW7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCRT1Q9BWW7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCRT1Q9BWW7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCRT1Q9BWW7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCRT1Q9BWW7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCRT1Q9BWW7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCRT1Q9BWW7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 CR559946.2-201ENST00000623684 991 ntBASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.5■□□□□ 0.55
SCRT1Q9BWW7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCRT1Q9BWW7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCRT1Q9BWW7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCRT1Q9BWW7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCRT1Q9BWW7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms