Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SLC6A7Q99884 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
SLC6A7Q99884 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC6A7Q99884 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC6A7Q99884 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SLC6A7Q99884 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.08■□□□□ 0.81
SLC6A7Q99884 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SLC6A7Q99884 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.08■□□□□ 0.81
SLC6A7Q99884 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A7Q99884 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SLC6A7Q99884 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A7Q99884 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SLC6A7Q99884 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SLC6A7Q99884 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SLC6A7Q99884 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.07■□□□□ 0.8
SLC6A7Q99884 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SLC6A7Q99884 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A7Q99884 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A7Q99884 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A7Q99884 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.07■□□□□ 0.8
SLC6A7Q99884 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SLC6A7Q99884 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A7Q99884 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A7Q99884 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A7Q99884 SLC6A10P-202ENST00000431994 2058 ntBASIC20.06■□□□□ 0.8
SLC6A7Q99884 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A7Q99884 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A7Q99884 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A7Q99884 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC6A7Q99884 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC6A7Q99884 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC6A7Q99884 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC6A7Q99884 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SLC6A7Q99884 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC6A7Q99884 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC6A7Q99884 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A7Q99884 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A7Q99884 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A7Q99884 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A7Q99884 AL451085.2-201ENST00000605085 799 ntBASIC20.04■□□□□ 0.8
SLC6A7Q99884 RAP2CP1-202ENST00000605179 643 ntBASIC20.04■□□□□ 0.8
SLC6A7Q99884 AL035685.1-201ENST00000636663 812 ntBASIC20.04■□□□□ 0.8
SLC6A7Q99884 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A7Q99884 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A7Q99884 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC6A7Q99884 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC6A7Q99884 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLC6A7Q99884 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A7Q99884 MIR3960-201ENST00000583311 91 ntBASIC20.03■□□□□ 0.8
SLC6A7Q99884 AC010980.1-201ENST00000587192 1142 ntBASIC20.03■□□□□ 0.8
SLC6A7Q99884 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC6A7Q99884 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC6A7Q99884 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC6A7Q99884 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A7Q99884 KRT8P33-201ENST00000508125 1423 ntBASIC20.02■□□□□ 0.8
SLC6A7Q99884 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A7Q99884 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SLC6A7Q99884 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A7Q99884 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
SLC6A7Q99884 SPCS2P3-201ENST00000500401 656 ntBASIC20.02■□□□□ 0.8
SLC6A7Q99884 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC6A7Q99884 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SLC6A7Q99884 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC6A7Q99884 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC6A7Q99884 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A7Q99884 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.01■□□□□ 0.79
SLC6A7Q99884 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLC6A7Q99884 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.01■□□□□ 0.79
SLC6A7Q99884 AC139795.1-202ENST00000500444 432 ntBASIC20.01■□□□□ 0.79
SLC6A7Q99884 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.01■□□□□ 0.79
SLC6A7Q99884 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SLC6A7Q99884 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC6A7Q99884 AC141586.4-201ENST00000624558 1573 ntBASIC20■□□□□ 0.79
SLC6A7Q99884 AC079834.2-201ENST00000609776 1949 ntBASIC20■□□□□ 0.79
SLC6A7Q99884 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC6A7Q99884 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLC6A7Q99884 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20■□□□□ 0.79
SLC6A7Q99884 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20■□□□□ 0.79
SLC6A7Q99884 DUSP8P5-201ENST00000422884 1815 ntBASIC19.99■□□□□ 0.79
SLC6A7Q99884 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A7Q99884 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A7Q99884 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SLC6A7Q99884 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SLC6A7Q99884 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A7Q99884 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.99■□□□□ 0.79
SLC6A7Q99884 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SLC6A7Q99884 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
SLC6A7Q99884 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC6A7Q99884 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
SLC6A7Q99884 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms