Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S3Q96PC3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP1S3Q96PC3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AP1S3Q96PC3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S3Q96PC3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S3Q96PC3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S3Q96PC3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
AP1S3Q96PC3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.4■□□□□ 0.38
AP1S3Q96PC3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP1S3Q96PC3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
AP1S3Q96PC3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.39■□□□□ 0.38
AP1S3Q96PC3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S3Q96PC3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.39■□□□□ 0.37
AP1S3Q96PC3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S3Q96PC3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S3Q96PC3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
AP1S3Q96PC3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.39■□□□□ 0.37
AP1S3Q96PC3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
AP1S3Q96PC3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.39■□□□□ 0.37
AP1S3Q96PC3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
AP1S3Q96PC3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
AP1S3Q96PC3 MIR219A2-201ENST00000608502 1504 ntBASIC17.37■□□□□ 0.37
AP1S3Q96PC3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 LINC01971-201ENST00000617888 1048 ntBASIC17.36■□□□□ 0.37
AP1S3Q96PC3 AC148477.6-201ENST00000623746 465 ntBASIC17.36■□□□□ 0.37
AP1S3Q96PC3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 AC068473.5-201ENST00000616428 2072 ntBASIC17.36■□□□□ 0.37
AP1S3Q96PC3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.36■□□□□ 0.37
AP1S3Q96PC3 AP003733.4-201ENST00000623785 1697 ntBASIC17.36■□□□□ 0.37
AP1S3Q96PC3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 HCG11-201ENST00000411553 5696 ntBASIC17.35■□□□□ 0.37
AP1S3Q96PC3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
AP1S3Q96PC3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S3Q96PC3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
AP1S3Q96PC3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S3Q96PC3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S3Q96PC3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S3Q96PC3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.34■□□□□ 0.37
AP1S3Q96PC3 AL359258.2-201ENST00000564063 1566 ntBASIC17.34■□□□□ 0.37
AP1S3Q96PC3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S3Q96PC3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
AP1S3Q96PC3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.34■□□□□ 0.37
AP1S3Q96PC3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S3Q96PC3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S3Q96PC3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S3Q96PC3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
AP1S3Q96PC3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S3Q96PC3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S3Q96PC3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S3Q96PC3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S3Q96PC3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
AP1S3Q96PC3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S3Q96PC3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S3Q96PC3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
AP1S3Q96PC3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
AP1S3Q96PC3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms